FastQCFastQC Report
Thu 9 May 2024
EGAF00008109863

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008109863
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28904951
Total Bases4.3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG911350.3152920065493278No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG297630.10296851913016562No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)