FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008115856

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008115856
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59543208
Total Bases6 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA51022068.568913519070051No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA42707007.172438542444673No Hit
ATTGACCCGCGTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA25938214.356199618938906No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA23692563.979053328802842No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA22638243.8019852742902263No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA22340163.7519241489306387No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT5987991.0056545828031302No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC5720010.960648609997634No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT5048020.847791069638035No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC4255220.7146440615023631No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG3974490.6674967865352501No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG3718170.624449055549711No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC3615920.607276651939882No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT3561790.5981857746058963No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC3427440.5756223279068202No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT3269720.5491340003044511No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT3121340.5242142815012587No Hit
ATTGACCCGCGTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT3085750.5182371094281651No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC3078030.5169405719624647No Hit
ATTGACCCGCGTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC2959210.49698531526887163No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT2725850.45779360762691856No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC2657150.44625576774432446No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT2351490.3949216172564972No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG2211080.3713404222358997No Hit
ATTGACCCGCGTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG2168450.3641809154790585No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG2147040.36058520730021804No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC2041190.34280820072710894No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG1938210.32551319707194815No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC1917130.32197291083140833No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT1907080.32028506089225156No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC1828860.3071483820623168No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG1741870.2925388232357249No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT1739450.2921323956881866No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA1727740.2901657566048507No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG1640630.2755360443461494No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC1631900.27406988216019534No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT1601550.2689727432892094No Hit
ATTGACCCGCGTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATT1529990.2569545799413428No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA1463960.24586515392318128No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA1441210.24204439908578657No Hit
ATTGACCCGCGTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC1432340.2405547245623716No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATG1307630.2196102702427454No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA1193450.20043427959071336No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATG1148690.19291704941393148No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG1142520.1918808271129765No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA1129850.18975296057276592No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA1121390.1883321436090578No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA1095830.1840394625697695No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG1085370.18228275507090583No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA1085150.1822458071120387No Hit
ATTGACCCGCGTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG1029960.1729769077944205No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATG988440.16600382028459065No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA987600.1658627462598253No Hit
ATTGACCCGCGTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA964230.16193786535653235No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG963810.16186732834414969No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACG941960.15819772424757497No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGC935850.15717157866267467No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC928280.15590023298711078No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC911840.15313921278813195No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGT883160.14832254251400093No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA864900.14525586192803047No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA862360.1448292809483829No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATG853190.14328922284469456No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT845080.1419271867246387No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC842400.1414770934075302No Hit
ATTGACCCGCGTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA830830.13953396666165518No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATG811940.13636148055711073No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA784910.13182191997448306No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGT780920.1311518183568477No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT770560.1294119053847418No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACG770240.1293581628991169No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT769190.1291818203681602No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGC746200.12532075866654682No Hit
ATTGACCCGCGTTAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATG718160.1206115733636656No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACG700370.1176238270534567No Hit
ATTGACCCGCGTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTT690310.11593429766162415No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACG688960.11570757155039413No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTA674320.11324885283305527No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC672080.11287265543368104No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCC652190.1095322240615588No Hit
AAATCTCTCAGGCTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG648260.10887219915997808No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAA640520.10757230278892599No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA611490.10269685167114274No Hit
AAATCTCTCAGGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGC606980.10193941851436691No Hit
AAATCTCTCAGGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACG606870.10192094453493335No Hit
ATTGACCCGCGTTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG600610.10086960715989639No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)