FastQCFastQC Report
Thu 9 May 2024
EGAF00008115907

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008115907
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7100661
Total Bases773.9 Mbp
Sequences flagged as poor quality0
Sequence length109
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCAACCTTCTAGGTAACGACCACATCTACAACGTTATCGTCACAGCCC146670.2065582345080268No Hit
CGGCCCCCCATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTC123780.17432179905504572No Hit
AGGCCACCTACGGTGAAAAGAAAGATGAATCCTAGGGCTCAGAGCACTGC122210.1721107372961475No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)