FastQCFastQC Report
Wed 8 May 2024
EGAF00008118628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008118628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199059
Total Bases59.9 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTACTGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG93384.691071491366881No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG83064.1726322346640945No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG70063.5195595275772513No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG63853.2075917190380743No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG55072.766516459944037No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG53192.6720720992268623No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG51562.5901868290305887No Hit
GACTACACGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG43082.1641824785616324No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG38401.9290763040103687No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG32051.6100754047794874No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG29201.466901772841218No Hit
GANTANTGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG24241.2177294169065453No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG24011.2061750536273166No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG23291.1700048729271222No Hit
GANTANTCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG20461.0278359682305247No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG19590.9841303332177898No Hit
GACTACTGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG18350.9218372442341215No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG18240.9163112444049252No Hit
GANTANCGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG17090.8585394280087814No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG16940.8510039736962408No Hit
GACTACTCGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG16790.8434685193837003No Hit
GANTANTAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG16140.8108148840293582No Hit
GACTACCGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG15380.7726352488458196No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG15300.7686163398791314No Hit
GANTANCCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG13610.6837168879578417No Hit
GANTANAGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG13200.6631199795035643No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG12910.6485514344993193No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG12560.6309687077700582No Hit
GANTANCAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG12300.6179072536283212No Hit
GACTACCCGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG11490.5772158003406025No Hit
GANTANACGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG11100.5576236191279972No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG10410.5229605292903109No Hit
GACTACAGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG10020.5033683480777056No Hit
GACTACACGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG9020.45313198599410226No Hit
GANTANAAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG8930.448610713406578No Hit
GANTANTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG8430.4234925323647763No Hit
GACTACAAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG8170.4104310782230394No Hit
GACTANTGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG7300.3667254432103045No Hit
GANTANCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG6800.3416072621685028No Hit
GANTANTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG6750.3390954440643226No Hit
GANTANTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG6140.3084512631933246No Hit
GACTANTCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG6140.3084512631933246No Hit
GACTANCGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG5580.2803189004265067No Hit
GACTANTAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG4800.24113453800129608No Hit
GANTANTGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG4720.23711562903460784No Hit
GANTANCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG4670.23460381093042765No Hit
GANTANCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG4520.22706835661788716No Hit
GANTANAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG4480.22505890213454302No Hit
GANTANTCGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG4170.20948562988862598No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGGGCATGAA4010.20144781195524944No Hit
GACTANCCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG3920.19692653936772514No Hit
GACTANAGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG3890.19541944850521706No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGGGCATGAA3800.19089817591769273No Hit
GANTANAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG3610.1813532671218081No Hit
GANTACTGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG3550.1783390853967919No Hit
GANTANTAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG3540.17783672177595589No Hit
GANTANACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG3540.17783672177595589No Hit
GACTACTCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCAG3520.1768319945342838No Hit
GACTANCAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG3470.17432017643010364No Hit
GANTANCGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG3440.17281308556759556No Hit
GACTACTGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCAG3420.17180835832592348No Hit
GNNTANTGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG3370.1692965402217433No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGGGCATGAA3350.16829181298007123No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAGCATGAA3310.1662823584967271No Hit
GACTANACGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG3190.16025399504669469No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAGCATGAA3090.15523035883833436No Hit
GANTANCCGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG3040.1527185407341542No Hit
GACTANAAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG3010.1512114498716461No Hit
GACTACCGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCAG2990.150206722629974No Hit
GANTACTCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG2990.150206722629974No Hit
GACTACTCGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC2970.14920199538830198No Hit
GNNTANTCGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG2940.14769490452579387No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAGCCTCAG2880.14468072280077765No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAGCCTCAG2780.13965708659241732No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG2760.13865235935074527No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGGGCATGAA2730.13714526848823716No Hit
GACTACTGGGGTATCTAATCCCGTTCGCTCCCCTGGCTTTCGCGCCTCAG2720.1366429048674011No Hit
GACTACTCGGGTATCTAATCCCGTTCGCTCCCCTGGCTTTCGCGCCTCAG2620.13161926865904078No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCAG2620.13161926865904078No Hit
GNNTANCGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG2600.13061454141736872No Hit
GACTACTGGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC2580.12960981417569664No Hit
GANTANAGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG2540.1276003596923525No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG2520.12659563245068045No Hit
GANTANACGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG2470.12408381434650029No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAGCCTCAG2460.12358145072566425No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGGGCATGAA2420.12157199624232011No Hit
GACTACTAGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC2350.11805545089646789No Hit
GACTACAGGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCAG2350.11805545089646789No Hit
GANTANCAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG2320.11654836003395978No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACATGAG2290.11504126917145167No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACATGAG2270.1140365419297796No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCAG2270.1140365419297796No Hit
GNNTANAGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG2260.11353417830894358No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAGCATGAA2260.11353417830894358No Hit
GACTACCCGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCAG2240.11252945106727151No Hit
GANTACAGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG2220.11152472382559946No Hit
GANTACTAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG2220.11152472382559946No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGGGCATGAA2200.11051999658392739No Hit
GACTANTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG2160.10851054210058325No Hit
GACTACCGGGGTATCTAATCCCGTTCGCTCCCCTGGCTTTCGCGCCTCAG2130.10700345123807514No Hit
GNNTANTAGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG2130.10700345123807514No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAGCATGAA2110.10599872399640307No Hit
GACTACCCGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC2090.104993996754731No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGAGCCTCAG2090.104993996754731No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGGGCATGAA2080.10449163313389496No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCTTTCGGGCATGAA2050.10298454227138688No Hit
GANTACCGGGGTATCTAATCCTGTTTGCTACCCATGCTTTCGCTCCTCAG2050.10298454227138688No Hit
GACTANTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG2030.10197981502971482No Hit
GACTACACGGGTATCTAATCCTGTTCGCTACCCATGCTTTCGCTCCTCAG2020.10147745140887877No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG2020.10147745140887877No Hit
GANTANAAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGAGCCTCAG2010.10097508778804275No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)