FastQCFastQC Report
Wed 8 May 2024
EGAF00008118880

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008118880
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31273
Total Bases9.4 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTACTGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG7092.267131391296006No Hit
GACTACTCGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG6882.1999808141208073No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG5691.819460876794679No Hit
GACTACCGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG5631.8002749976017651No Hit
GACTACCCGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG5331.7043456016371952No Hit
GACTACAGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG4381.400569181082723No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG4191.3398138969718287No Hit
GACTACACGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG3421.0935951139960989No Hit
GACTACAAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG3241.0360374764173568No Hit
GACTACTGGGGTATCTAATCCGCTATGTACACATCTGACGCTGCCGACGA2340.7482492885236466No Hit
GACTACTCGGGTATCTAATCCGCTATGTACACATCTGACGCTGCCGACGA2280.7290634093307327No Hit
GACTACTCGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC2120.6779010648162952No Hit
GACTACTGGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC2100.6715057717519906No Hit
GACTACTAGGGTATCTAATCCGCTATGTACACATCTGACGCTGCCGACGA2090.6683081252198383No Hit
GACTACCCGGGTATCTAATCCGCTATGTACACATCTGACGCTGCCGACGA1930.6171457807054008No Hit
GACTACCAGGGTATCTAATCCGCTATGTACACATCTGACGCTGCCGACGA1830.5851693153838775No Hit
GACTACCCGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC1750.5595881431266588No Hit
GACTACCGGGGTATCTAATCCGCTATGTACACATCTGACGCTGCCGACGA1560.4988328590157644No Hit
GACTACCAGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC1560.4988328590157644No Hit
GACTACTAGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC1530.48923991941930733No Hit
GACTACTCGGGTATCTAATCCCAAGTCTACACATCTGACGCTGCCGACGA1450.46365874716208866No Hit
GACTACAGGGGTATCTAATCCGCTATGTACACATCTGACGCTGCCGACGA1330.4252869887762607No Hit
GACTACCGGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC1330.4252869887762607No Hit
GACTACAAGGGTATCTAATCCGCTATGTACACATCTGACGCTGCCGACGA1320.4220893422441084No Hit
GACTACTGGGGTATCTAATCCCAAGTCTACACATCTGACGCTGCCGACGA1290.4124964026476513No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG1250.39970581651904197No Hit
GACTACACGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC1230.39331052345473727No Hit
GACTACTCGGGTATCTAATCCCATTCGAACACATCTGACGCTGCCGACGA1180.37732229079397567No Hit
GACTACCCGGGTATCTAATCCCAAGTCTACACATCTGACGCTGCCGACGA1110.35493876506890926No Hit
GACTACCAGGGTATCTAATCCCAAGTCTACACATCTGACGCTGCCGACGA1100.35174111853675694No Hit
GACTACACGGGTATCTAATCCGCTATGTACACATCTGACGCTGCCGACGA1080.3453458254724523No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG1080.3453458254724523No Hit
GACTACTAGGGTATCTAATCCCAAGTCTACACATCTGACGCTGCCGACGA1070.3421481789402999No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG1060.3389505324081476No Hit
GACTACAGGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC1050.3357528858759953No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG1040.3325552393438429No Hit
GACTACTCGGGTATCTAATCCGGCGTGAACACATCTGACGCTGCCGACGA980.3133693601509289No Hit
GACTACTGGGGTATCTAATCCCATTCGAACACATCTGACGCTGCCGACGA970.3101717136187766No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG940.3005787740223196No Hit
GACTACCGGGGTATCTAATCCCAAGTCTACACATCTGACGCTGCCGACGA910.29098583442586257No Hit
GACTACACGGGTATCTAATCCCAAGTCTACACATCTGACGCTGCCGACGA890.2845905413615579No Hit
GACTACAGGGGTATCTAATCCCAAGTCTACACATCTGACGCTGCCGACGA860.2749976017651009No Hit
GACTACAAGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC830.2654046621686439No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG830.2654046621686439No Hit
GACTACTAGGGTATCTAATCCCATTCGAACACATCTGACGCTGCCGACGA820.26220701563649157No Hit
GACTACCCGGGTATCTAATCCCATTCGAACACATCTGACGCTGCCGACGA790.2526140760400345No Hit
GACTACTGGGGTATCTAATCCGGCGTGAACACATCTGACGCTGCCGACGA770.24621878297572986No Hit
GACTACCAGGGTATCTAATCCCATTCGAACACATCTGACGCTGCCGACGA740.23662584337927287No Hit
GACTACCCGGGTATCTAATCCGGCGTGAACACATCTGACGCTGCCGACGA740.23662584337927287No Hit
GACTACTGGGGTATCTAATCCAACAATGACACATCTGACGCTGCCGACGA720.23023055031496817No Hit
GACTACTGGGGTATCTAATCCTCTATGTACACATCTGACGCTGCCGACGA700.22383525725066353No Hit
GACTACTCGGGTATCTAATCCTCTATGTACACATCTGACGCTGCCGACGA660.2110446711220542No Hit
GACTACTCGGGTATCTAATCCCGCGGTTACACATCTGACACTGCCGACGA640.2046493780577495No Hit
GACTACTCGGGTATCTAATCCAACAATGACACATCTGACGCTGCCGACGA620.19825408499344485No Hit
GACTACTCGGGTATCTAATCCCCTCGTCACACATCTGACGCTGCCGACGA610.1950564384612925No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG610.1950564384612925No Hit
GACTACCCGGGTATCTAATCCTCTATGTACACATCTGACGCTGCCGACGA600.19185879192914015No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG580.18546349886483549No Hit
GACTACTGGGGTATCTAATCCCGCGGTTACACATCTGACACTGCCGACGA570.18226585233268316No Hit
GACTACCAGGGTATCTAATCCGGCGTGAACACATCTGACGCTGCCGACGA570.18226585233268316No Hit
GACTACTGGGGTATCTAATCCGCTATGTGCACATCTGACGCTGCCGACGA560.17906820580053082No Hit
GACTACTAGGGTATCTAATCCGGCGTGAACACATCTGACGCTGCCGACGA560.17906820580053082No Hit
GACTACAGGGGTATCTAATCCCATTCGAACACATCTGACGCTGCCGACGA560.17906820580053082No Hit
GACTACTGGGGTATCTAATCCCCTCGTCACACATCTGACGCTGCCGACGA550.17587055926837847No Hit
GACTACCGGGGTATCTAATCCCATTCGAACACATCTGACGCTGCCGACGA540.17267291273622615No Hit
GACTACACGGGTATCTAATCCCATTCGAACACATCTGACGCTGCCGACGA530.1694752662040738No Hit
GACTACTAGGGTATCTAATCCTCTATGTACACATCTGACGCTGCCGACGA520.16627761967192145No Hit
GACTACCGGGGTATCTAATCCGGCGTGAACACATCTGACGCTGCCGACGA520.16627761967192145No Hit
GACTACTCGGGTATCTAATCCTGTGAAGACATATCTGACGCTGCCGACGA520.16627761967192145No Hit
GACTACACGGGTATCTAATCCGGCGTGAACACATCTGACGCTGCCGACGA510.16307997313976913No Hit
GACTACAAGGGTATCTAATCCCAAGTCTACACATCTGACGCTGCCGACGA500.15988232660761678No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA500.15988232660761678No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAG500.15988232660761678No Hit
GACTACTAGGGTATCTAATCCAACAATGACACATCTGACGCTGCCGACGA500.15988232660761678No Hit
GACTACTCGGGTATCTAATCCGCTATGTACACATCCGACGCTGCCGACGA490.15668468007546446No Hit
GACTACAAGGGTATCTAATCCGGCGTGAACACATCTGACGCTGCCGACGA490.15668468007546446No Hit
GACTACTGGGGTATCTAATCCGCTATGTACACATCCGACGCTGCCGACGA480.1534870335433121No Hit
GACTACTCGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCAG470.1502893870111598No Hit
GACTACCCGGGTATCTAATCCCGCGGTTACACATCTGACACTGCCGACGA470.1502893870111598No Hit
GACTACACGGGTATCTAATCCTCTATGTACACATCTGACGCTGCCGACGA470.1502893870111598No Hit
GACTACCAGGGTATCTAATCCCGCGGTTACACATCTGACACTGCCGACGA470.1502893870111598No Hit
GACTACAAGGGTATCTAATCCCATTCGAACACATCTGACGCTGCCGACGA460.14709174047900744No Hit
GACTACCGGGGTATCTAATCCCCTCGTCACACATCTGACGCTGCCGACGA460.14709174047900744No Hit
GACTACCCGGGTATCTAATCCAACAATGACACATCTGACGCTGCCGACGA450.14389409394685512No Hit
GACTACTCGGGTATCTAATCCCATGAAGACACATCTGACGCTGCCGACGA450.14389409394685512No Hit
GACTACTCGGGTATCTAATCCGCTATGTGCACATCTGACGCTGCCGACGA450.14389409394685512No Hit
GACTACTAGGGTATCTAATCCGCTATGTGCACATCTGACGCTGCCGACGA450.14389409394685512No Hit
GACTACAGGGGTATCTAATCCGGCGTGAACACATCTGACGCTGCCGACGA440.14069644741470277No Hit
GACTACTGGGGTATCTAATCCTACAATGACACATCTGACGCTGCCGACGA440.14069644741470277No Hit
GACTACCGGGGTATCTAATCCTCTATGTACACATCTGACGCTGCCGACGA430.13749880088255045No Hit
GACTACTAGGGTATCTAATCCTGTGAAGACATATCTGACGCTGCCGACGA430.13749880088255045No Hit
GACTACTAGGGTATCTAATCCCCTCGTCACACATCTGACGCTGCCGACGA430.13749880088255045No Hit
GACTACTCGGGTATCTAATCCTGTCCAAACACATCTGACGCTGCCGACGA420.1343011543503981No Hit
GACTACTGGGGTATCTAATCCTGTGAAGACATATCTGACGCTGCCGACGA420.1343011543503981No Hit
GACTACCGGGGTATCTAATCCCGCGGTTACACATCTGACACTGCCGACGA420.1343011543503981No Hit
GACTACCAGGGTATCTAATCCTCTATGTACACATCTGACGCTGCCGACGA410.13110350781824578No Hit
GACTACTGGGGTATCTAATCCCCAACTGCTGCCCCCCGTAGGCGCCTCTT410.13110350781824578No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCAG410.13110350781824578No Hit
GACTACTCGGGTATCTAATCCTCACCAAACACATCTGACGCTGCCGACGA410.13110350781824578No Hit
GACTACTGGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCAG410.13110350781824578No Hit
GACTACTAGGGTATCTAATCCCATGAAGACACATCTGACGCTGCCGACGA400.12790586128609344No Hit
GACTACCAGGGTATCTAATCCCCTCGTCACACATCTGACGCTGCCGACGA400.12790586128609344No Hit
GACTACAGGGGTATCTAATCCTCTATGTACACATCTGACGCTGCCGACGA400.12790586128609344No Hit
GACTACTAGGGTATCTAATCCTACAATGACACATCTGACGCTGCCGACGA390.1247082147539411No Hit
GACTACCCGGGTATCTAATCCCATGAAGACACATCTGACGCTGCCGACGA380.12151056822178877No Hit
GACTACCGGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCAG380.12151056822178877No Hit
GACTACCCGGGTATCTAATCCTGTGAAGACATATCTGACGCTGCCGACGA380.12151056822178877No Hit
GACTACCCGGGTATCTAATCCGCTATGTGCACATCTGACGCTGCCGACGA380.12151056822178877No Hit
GACTACCAGGGTATCTAATCCAACAATGACACATCTGACGCTGCCGACGA380.12151056822178877No Hit
GACTACTGGGGTATCTAATCCCATGAAGACACATCTGACGCTGCCGACGA370.11831292168963643No Hit
GACTACACGGGTATCTAATCCAACAATGACACATCTGACGCTGCCGACGA370.11831292168963643No Hit
GACTACTCGGGTATCTAATCCCCAACTGCTGCCCCCCGTAGGCGCCTCTT370.11831292168963643No Hit
GACTACTCGGGTATCTAATCCTACAATGACACATCTGACGCTGCCGACGA360.11511527515748408No Hit
GACTACTAGGGTATCTAATCCCGCGGTTACACATCTGACACTGCCGACGA360.11511527515748408No Hit
GACTACCCGGGTATCTAATCCCCTCGTCACACATCTGACGCTGCCGACGA360.11511527515748408No Hit
GACTACCGGGGTATCTAATCCAACAATGACACATCTGACGCTGCCGACGA360.11511527515748408No Hit
GACTACCAGGGTATCTAATCCGCTATGTGCACATCTGACGCTGCCGACGA350.11191762862533176No Hit
GACTACCCGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCAG350.11191762862533176No Hit
GACTACAAGGGTATCTAATCCCGCGGTTACACATCTGACACTGCCGACGA350.11191762862533176No Hit
GACTACAAGGGTATCTAATCCTCTATGTACACATCTGACGCTGCCGACGA350.11191762862533176No Hit
GACTACCGGGGTATCTAATCCGCTATGTACACATCCGACGCTGCCGACGA350.11191762862533176No Hit
GACTACTCGGGTATCTAATCCGCTATGTACACATCTGACACTGCCGACGA340.10871998209317942No Hit
GACTACTAGGGTATCTAATCCTGTCCAAACACATCTGACGCTGCCGACGA340.10871998209317942No Hit
GACTACTCGGGTATCTAATCCTCTATGTACACATCTGACACTGCCGACGA340.10871998209317942No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTCCCCATGCTTTCGCTTCTCAG340.10871998209317942No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA340.10871998209317942No Hit
GACTACTGGGGTATCTAATCCGCTATGTACACATCTGACACTGCCGACGA340.10871998209317942No Hit
GACTACCCGGGTATCTAATCCGCTATGTACACATCCGACGCTGCCGACGA330.1055223355610271No Hit
GACTACCGGGGTATCTAATCCTGTGAAGACATATCTGACGCTGCCGACGA330.1055223355610271No Hit
GACTACTAGGGTATCTAATCCTATTCGAACACATCTGACGCTGCCGACGA330.1055223355610271No Hit
GACTACTCGGGTATCTAATCCACTATGTACACATCTGACGCTGCCGACGA320.10232468902887475No Hit
GACTACTCGGGTATCTAATCCTATTCGAACACATCTGACGCTGCCGACGA320.10232468902887475No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAA320.10232468902887475No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)