FastQCFastQC Report
Wed 2 Aug 2023
EGAF00008118910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008118910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91161
Sequences flagged as poor quality0
Sequence length301
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTACTGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG951010.432092671208082No Hit
GACTACTCGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG89469.813407049067035No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG70417.723697633856584No Hit
GACTACCGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG65727.209223242395322No Hit
GACTACCCGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG58926.463290222792642No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG52175.722842004804686No Hit
GACTACAGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG50215.507837781507443No Hit
GACTACACGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG43784.8024922938537316No Hit
GACTACAAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCAG38954.272660457871239No Hit
GACTACTCGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC3060.3356698588212065No Hit
GACTACTGGGGTATCTAATCCTGTTCGCTCCCCACGNTTTCGCTCCTCAG2980.3268941762376455No Hit
GACTACTGGGGTATCTAATCNTGTTCGCTCCCCACGCTTTCGCTCCTCAG2960.32470025559175525No Hit
GACTACTGGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC2840.31153673171641383No Hit
GACTACTCGGGTATCTAATCCTGTTCGCTCCCCACGNTTTCGCTCCTCAG2730.2994701681640175No Hit
GACTACTCGGGTATCTAATCNTGTTCGCTCCCCACGCTTTCGCTCCTCAG2500.27424008073627976No Hit
GACTACTAGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC2240.2457191123397067No Hit
GACTACCGGGGTATCTAATCCTGTTCGCTCCCCACGNTTTCGCTCCTCAG2190.24023431072498108No Hit
GACTACCCGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC2140.2347495091102555No Hit
GACTACCAGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC2080.22816774717258478No Hit
GACTACCGGGGTATCTAATCNTGTTCGCTCCCCACGCTTTCGCTCCTCAG2070.22707078684963966No Hit
GACTACCCGGGTATCTAATCCTGTTCGCTCCCCACGNTTTCGCTCCTCAG1960.21500422329724334No Hit
GACTACTAGGGTATCTAATCNTGTTCGCTCCCCACGCTTTCGCTCCTCAG1900.20842246135957262No Hit
GACTACTAGGGTATCTAATCCTGTTCGCTCCCCACGNTTTCGCTCCTCAG1890.2073255010366275No Hit
GACTACCGGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC1830.2007437390989568No Hit
GACTACCCGGGTATCTAATCNTGTTCGCTCCCCACGCTTTCGCTCCTCAG1770.19416197716128608No Hit
GACTACCAGGGTATCTAATCCTGTTCGCTCCCCACGNTTTCGCTCCTCAG1700.18648325490067025No Hit
GACTACACGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC1560.17112581037943858No Hit
GACTACCAGGGTATCTAATCNTGTTCGCTCCCCACGCTTTCGCTCCTCAG1560.17112581037943858No Hit
GACTACAGGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC1510.165641008764713No Hit
GACTACAGGGGTATCTAATCCTGTTCGCTCCCCACGNTTTCGCTCCTCAG1410.1546714055352618No Hit
GACTACACGGGTATCTAATCNTGTTCGCTCCCCACGCTTTCGCTCCTCAG1390.15247748488937155No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCTCCTCAG1360.1491866039205362No Hit
GACTACAGGGGTATCTAATCNTGTTCGCTCCCCACGCTTTCGCTCCTCAG1330.14589572295170083No Hit
GACTACACGGGTATCTAATCCTGTTCGCTCCCCACGNTTTCGCTCCTCAG1310.1437018023058106No Hit
GACTACAAGGGTATCTAATCCTGTTCGCTCCCCACGNTTTCGCTCCTCAG1310.1437018023058106No Hit
GACTACAAGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC1290.14150788165992037No Hit
GACTACTCGGGTATCTAATCCGCTATGTACACATCTGACGCTGCCGACGA1070.11737475455512775No Hit
GACTACAAGGGTATCTAATCNTGTTCGCTCCCCACGCTTTCGCTCCTCAG1040.11408387358629239No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCTCCTCAG1030.11298691326334727No Hit
GACTACTGGGGTATCTAATCCGCTATGTACACATCTGACGCTGCCGACGA950.10421123067978631No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)