FastQCFastQC Report
Wed 8 May 2024
EGAF00008118958

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008118958
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences182751
Total Bases55 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG1883510.306373152540889No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG176589.662327429124874No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG136337.459877100535701No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG133497.3044743941209616No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG114996.292168031912274No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG105165.754277678371117No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG103615.669462820996875No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG89834.915431379308458No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCAG78154.276310389546432No Hit
GACTACTCGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC8210.44924514776936925No Hit
GACTACTGGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC7330.4010921964859289No Hit
GACTACTAGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC6380.3491088968049423No Hit
GACTACCCGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC5430.29712559712395553No Hit
GACTACTGGGGTATCTAATCNTGTTTGCTCCCCACGCTTTCGTGCCTCAG5120.28016262564910727No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGNTTTCGTGCCTCAG5020.2746906993668981No Hit
GACTACCAGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC4810.263199654174259No Hit
GACTACTCGGGTATCTAATCNTGTTTGCTCCCCACGCTTTCGTGCCTCAG4740.2593693057767126No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGNTTTCGTGCCTCAG4630.2533501868662825No Hit
GACTACCGGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC4380.2396703711607597No Hit
GACTACTAGGGTATCTAATCNTGTTTGCTCCCCACGCTTTCGTGCCTCAG4110.22489617019879507No Hit
GACTACCGGGGTATCTAATCNTGTTTGCTCCCCACGCTTTCGTGCCTCAG3910.2139523176343768No Hit
GACTACAGGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC3900.2134051250061559No Hit
GACTACAAGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC3660.20027250192885404No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG3540.19370619039020306No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG3530.19315899776198214No Hit
GACTACACGGGTATCTAATCCGAAGACCTTCTTCCTCCACGCGGCGTCGC3470.18987584199265667No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGNTTTCGTGCCTCAG3330.1822151451975639No Hit
GACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCAG3330.1822151451975639No Hit
GACTACCCGGGTATCTAATCNTGTTTGCTCCCCACGCTTTCGTGCCTCAG3300.18057356731290117No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGNTTTCGTGCCTCAG3250.17783760417179661No Hit
GACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCAG2970.16251621058161106No Hit
GACTACCAGGGTATCTAATCNTGTTTGCTCCCCACGCTTTCGTGCCTCAG2920.15978024744050648No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGNTTTCGTGCCTCAG2890.15813866955584374No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGNTTTCGTGCCTCAG2890.15813866955584374No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG2840.1554027064147392No Hit
GACTACAGGGGTATCTAATCNTGTTTGCTCCCCACGCTTTCGTGCCTCAG2750.15047797276075098No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGNTTTCGTGCCTCAG2570.14062850545277453No Hit
GACTACACGGGTATCTAATCNTGTTTGCTCCCCACGCTTTCGTGCCTCAG2460.1346093865423445No Hit
GACTACAAGGGTATCTAATCNTGTTTGCTCCCCACGCTTTCGTGCCTCAG2350.12859026763191445No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGNTTTCGTGCCTCAG2240.12257114872148442No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG2220.1214767634650426No Hit
GACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCAG2170.11874080032393804No Hit
GACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTTCCTCAG2160.11819360769571713No Hit
GACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG2120.11600483718283347No Hit
GACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG2030.11108010352884526No Hit
GACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGNTTTCGTGCCTCAG1960.10724975513129886No Hit
GACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG1840.10068344359264793No Hit
GACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCAG1840.10068344359264793No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)