FastQCFastQC Report
Wed 8 May 2024
EGAF00008119761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008119761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40447
Total Bases12.1 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT9292.296832892427127No Hit
CCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGAC7301.8048310134249759No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT5791.4315029544836453No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT5301.310356763171558No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT5151.2732711944025514No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT5131.2683264519000172No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT5051.2485474818898807No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT4831.1941553143620045No Hit
CCTACGGGAGGCAGCAGTCGTCGGCAGCGTCAGATGTGGATTAGATACCC4721.1669592305980665No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT4641.14718026058793No Hit
CCTACGGGGGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGAC4601.1372907755828614No Hit
CCTACGGGCGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGAC4181.0334511830296438No Hit
CCTACGGGTGGCTGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGAC3990.9864761292555689No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT3870.9568076742403638No Hit
CCTACGGGGGGCTGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGAC3830.9469181892352956No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGAC3790.9370287042302272No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT3660.904887877963755No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT3630.8974707642099536No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT3370.8331891116770095No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT3330.823299626671941No Hit
CCTACGGGCGGCTGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGAC3090.7639627166415309No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT2990.73923900412886No Hit
CCTACGGGCGGCAGCAGTCGTCGGCAGCGTCAGATGTGGATTAGATACCC2880.712042920364922No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT2880.712042920364922No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT2870.7095705491136549No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT2840.7021534353598536No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT2760.6823744653497169No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT2590.6403441540781765No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT2470.6106756990629714No Hit
CCTACGGGAGGCTGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGAC2470.6106756990629714No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT2410.5958414715553688No Hit
CCTACGGGGGGCAGCAGTCGTCGGCAGCGTCAGATGTGGATTAGATACCC2230.5513387890325612No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT2210.5463940465300269No Hit
CCTACGGGTGGCAGCAGTCGTCGGCAGCGTCAGATGTGGATTAGATACCC2100.519197962766089No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT1990.492001879002151No Hit
CCTACGGGGGGCTGCAGTCGTCGGCAGCGTCAGATGTGGATTAGATACCC1890.46727816648948006No Hit
CCTACGGGCGGCTGCAGTCGTCGGCAGCGTCAGATGTGGATTAGATACCC1840.45491631023314466No Hit
CCTACGGGTGGCTGCAGTCGTCGGCAGCGTCAGATGTGGATTAGATACCC1810.4474991964793434No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT1610.3980517714540015No Hit
CCTACGGGAGGCTGCAGTCGTCGGCAGCGTCAGATGTGGATTAGATACCC1560.3856899151976661No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT1270.31399114891092045No Hit
CCTACGGGAGGCAGCAGACGAGGATTAGATACCCGGGTAGTCCTGTCTCT1100.27196083763937995No Hit
CCTACGGGAGGCAGCAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGAC1070.2645437238855787No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGAGGGAACTCTGAT1050.2595989813830445No Hit
CCTACGGGAGGCAGCAGATGTGGATTAGATACCCGGGTAGTCCTGTCTCT1030.2546542388805103No Hit
CCTACGGGAGGCAGCAGACGAGGATTAGATACCCTTGTAGTCCTGTCTCT980.24229238262417485No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT940.23240289761910649No Hit
CCTACGGGAGGCAGCAGACGAGGATTAGATACCCTGGTAGTCCTGTCTCT920.22745815511657233No Hit
CCTACGGGAGGCAGCAGACGAGGATTAGATACCCCAGTAGTCCTGTCTCT910.2249857838653052No Hit
CCTACGGGAGGCAGCAGATGTGGATTAGATACCCTTGTAGTCCTGTCTCT890.22004104136277106No Hit
CCTACGGGAGGCAGCAGATGTGGATTAGATACCCTGGTAGTCCTGTCTCT870.21509629886023685No Hit
CCTACGGGAGGCAGCAGTGAGGGATATTGGGTAGCAAACAGGATTAGATA850.21015155635770266No Hit
CCTACGGGAGGCAGCAGATGTGGATTAGATACCCCAGTAGTCCTGTCTCT800.19778970010136723No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT790.1953173288501001No Hit
CCTACGGGAGGCAGCAGACGAGGATTAGATACCCCGGTAGTCCTGTCTCT780.19284495759883305No Hit
CCTACGGGAGGCAGCAGATGTGGATTAGATACCCGAGTAGTCCTGTCTCT750.18542784384503178No Hit
CCTACGGGTGGCTGCAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGAC720.1780107300912305No Hit
CCTACGGGAGGCAGCAGATGTGGATTAGATACCCTAGTAGTCCTGTCTCT710.1755383588399634No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT710.1755383588399634No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT700.17306598758869632No Hit
CCTACGGGAGGCAGCAGACGAGGATTAGATACCCGAGTAGTCCTGTCTCT700.17306598758869632No Hit
CCTACGGGCGGCAGCAGACGAGGATTAGATACCCCAGTAGTCCTGTCTCT680.16812124508616214No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT670.16564887383489504No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT660.16317650258362795No Hit
CCTACGGGAGGCAGCAGACGAGGATTAGATACCCTAGTAGTCCTGTCTCT640.1582317600810938No Hit
CCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGAC620.1532870175785596No Hit
CCTACGGGTGGCAGCAGACGAGGATTAGATACCCCAGTAGTCCTGTCTCT610.15081464632729252No Hit
CCTACGGGCGGCAGCAGACGAGGATTAGATACCCTGGTAGTCCTGTCTCT600.14834227507602543No Hit
CCTACGGGTGGCAGCAGATGTGGATTAGATACCCTTGTAGTCCTGTCTCT600.14834227507602543No Hit
CCTACGGGGGGCAGCAGACGAGGATTAGATACCCGAGTAGTCCTGTCTCT600.14834227507602543No Hit
CCTACGGGGGGCTGCAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGAC600.14834227507602543No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT590.1458699038247583No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGAGGGAACTCTGAT590.1458699038247583No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT590.1458699038247583No Hit
CCTACGGGAGGCAGCAGACGAGGATTAGATACCCCTGTAGTCCTGTCTCT590.1458699038247583No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT590.1458699038247583No Hit
CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGGAACCCTGAT580.14339753257349125No Hit
CCTACGGGTGGCAGCAGACGAGGATTAGATACCCTTGTAGTCCTGTCTCT570.14092516132222416No Hit
CCTACGGGGGGCTGCAGATGTGGATTAGATACCCGGGTAGTCCTGTCTCT570.14092516132222416No Hit
CCTACGGGAGGCAGCAGACGAGGATTAGATACCCGTGTAGTCCTGTCTCT550.13598041881968997No Hit
CCTACGGGCGGCTGCAGATGTGGATTAGATACCCGGGTAGTCCTGTCTCT550.13598041881968997No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT540.13350804756842288No Hit
CCTACGGGGGGCAGCAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGAC540.13350804756842288No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGAGGGAACTCTGAT540.13350804756842288No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGAGGGAACTCTGAT540.13350804756842288No Hit
CCTACGGGAGGCTGCAGACGAGGATTAGATACCCTTGTAGTCCTGTCTCT530.1310356763171558No Hit
CCTACGGGTGGCTGCAGATGTGGATTAGATACCCTGGTAGTCCTGTCTCT530.1310356763171558No Hit
CCTACGGGGGGCAGCAGACGAGGATTAGATACCCGGGTAGTCCTGTCTCT530.1310356763171558No Hit
CCTACGGGTGGCTGCAGTGAGGGATATTGGGTAGCAAACAGGATTAGATA530.1310356763171558No Hit
CCTACGGGGGGCAGCAGATGTGGATTAGATACCCTGGTAGTCCTGTCTCT520.1285633050658887No Hit
CCTACGGGAGGCAGCAGATGTGGATTAGATACCCGTGTAGTCCTGTCTCT520.1285633050658887No Hit
CCTACGGGCGGCTGCAGATGTGGATTAGATACCCCAGTAGTCCTGTCTCT520.1285633050658887No Hit
CCTACGGGAGGCAGCAGATGTGGATTAGATACCCCTGTAGTCCTGTCTCT510.1260909338146216No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT510.1260909338146216No Hit
CCTACGGGGGGCTGCAGACGAGGATTAGATACCCTTGTAGTCCTGTCTCT510.1260909338146216No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT510.1260909338146216No Hit
CCTACGGGCGGCAGCAGACGAGGATTAGATACCCGGGTAGTCCTGTCTCT510.1260909338146216No Hit
CCTACGGGCGGCAGCAGACGAGGATTAGATACCCGAGTAGTCCTGTCTCT510.1260909338146216No Hit
CCTACGGGAGGCAGCAGTCGTCGGCAGCGTCAGATGTGGATTAGCTACCC510.1260909338146216No Hit
CCTACGGGCGGCTGCAGATGTGGATTAGATACCCTTGTAGTCCTGTCTCT500.1236185625633545No Hit
CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT500.1236185625633545No Hit
CCTACGGGCGGCTGCAGACGAGGATTAGATACCCTTGTAGTCCTGTCTCT500.1236185625633545No Hit
CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT500.1236185625633545No Hit
CCTACGGGTGGCTGCAGATGTGGATTAGATACCCCGGTAGTCCTGTCTCT500.1236185625633545No Hit
CCTACGGGCGGCTGCAGACGAGGATTAGATACCCGGGTAGTCCTGTCTCT490.12114619131208743No Hit
CCTACGGGGGGCTGCAGATGTGGATTAGATACCCGAGTAGTCCTGTCTCT490.12114619131208743No Hit
CCTACGGGAGGCAGCAGATGTGGATTAGATACCCCGGTAGTCCTGTCTCT490.12114619131208743No Hit
CCTACGGGAGGCTGCAGATGTGGATTAGATACCCGGGTAGTCCTGTCTCT480.11867382006082033No Hit
CCTACGGGAGGCTGCAGACGAGGATTAGATACCCTAGTAGTCCTGTCTCT480.11867382006082033No Hit
CCTACGGGCGGCAGCAGATGTGGATTAGATACCCGAGTAGTCCTGTCTCT480.11867382006082033No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGCACAATGGGGGAAACCCTGAT470.11620144880955324No Hit
CCTACGGGTGGCTGCAGATGTGGATTAGATACCCTTGTAGTCCTGTCTCT470.11620144880955324No Hit
CCTACGGGTGGCTGCAGACGAGGATTAGATACCCCAGTAGTCCTGTCTCT470.11620144880955324No Hit
CCTACGGGTGGCAGCAGACGAGGATTAGATACCCCGGTAGTCCTGTCTCT470.11620144880955324No Hit
CCTACGGGTGGCAGCAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGAC470.11620144880955324No Hit
CCTACGGGGGGCTGCAGATGTGGATTAGATACCCTTGTAGTCCTGTCTCT470.11620144880955324No Hit
CCTACGGGCGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT470.11620144880955324No Hit
CCTACGGGCGGCTGCAGACGAGGATTAGATACCCGAGTAGTCCTGTCTCT470.11620144880955324No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT470.11620144880955324No Hit
CCTACGGGTGGCTGCAGATGTGGATTAGATACCCGGGTAGTCCTGTCTCT470.11620144880955324No Hit
CCTACGGGCGGCTGCAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGAC470.11620144880955324No Hit
CCTACGGGCGGCAGCAGACGAGGATTAGATACCCTAGTAGTCCTGTCTCT460.11372907755828617No Hit
CCTACGGGCGGCTGCAGACGAGGATTAGATACCCTGGTAGTCCTGTCTCT460.11372907755828617No Hit
CCTACGGGAGGCAGCAGTAGGGAATCTTCGGCAATGGACGGAAGTCTGAC460.11372907755828617No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT460.11372907755828617No Hit
CCTACGGGAGGCTGCAGACGAGGATTAGATACCCGGGTAGTCCTGTCTCT460.11372907755828617No Hit
CCTACGGGCGGCAGCAGACGAGGATTAGATACCCCGGTAGTCCTGTCTCT460.11372907755828617No Hit
CCTACGGGTGGCAGCAGATGTGGATTAGATACCCCAGTAGTCCTGTCTCT460.11372907755828617No Hit
CCTACGGGCGGCAGCAGATGTGGATTAGATACCCTTGTAGTCCTGTCTCT460.11372907755828617No Hit
CCTACGGGCGGCAGCAGACGAGGATTAGATACCCTTGTAGTCCTGTCTCT460.11372907755828617No Hit
CCTACGGGCGGCAGCAGATGTGGATTAGATACCCTGGTAGTCCTGTCTCT450.11125670630701906No Hit
CCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGACGGAAGTCTGAC450.11125670630701906No Hit
CCTACGGGGGGCAGCAGACGAGGATTAGATACCCTTGTAGTCCTGTCTCT450.11125670630701906No Hit
CCTACGGGTGGCTGCAGATGTGGATTAGATACCCGAGTAGTCCTGTCTCT440.10878433505575197No Hit
CCTACGGGTGGCAGCAGATGTGGATTAGATACCCTGGTAGTCCTGTCTCT440.10878433505575197No Hit
CCTACGGGGGGCAGCAGATGTGGATTAGATACCCGGGTAGTCCTGTCTCT440.10878433505575197No Hit
CCTACGGGGGGCTGCAGACGAGGATTAGATACCCGAGTAGTCCTGTCTCT440.10878433505575197No Hit
CCTACGGGGGGCTGCAGTGAGGGATATTGGGTAGCAAACAGGATTAGATA430.10631196380448489No Hit
CCTACGGGTGGCAGCAGATGTGGATTAGATACCCCGGTAGTCCTGTCTCT430.10631196380448489No Hit
CCTACGGGCGGCTGCAGATGTGGATTAGATACCCTAGTAGTCCTGTCTCT430.10631196380448489No Hit
CCTACGGGTGGCAGCAGACGAGGATTAGATACCCGGGTAGTCCTGTCTCT430.10631196380448489No Hit
CCTACGGGAGGCTGCAGATGTGGATTAGATACCCTTGTAGTCCTGTCTCT430.10631196380448489No Hit
CCTACGGGAGGCTGCAGATGTGGATTAGATACCCTGGTAGTCCTGTCTCT430.10631196380448489No Hit
CCTACGGGTGGCAGCAGACGAGGATTAGATACCCGAGTAGTCCTGTCTCT430.10631196380448489No Hit
CCTACGGGCGGCTGCAGACGAGGATTAGATACCCCGGTAGTCCTGTCTCT420.10383959255321779No Hit
CCTACGGGTGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT420.10383959255321779No Hit
CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGAGGGAACTCTGAT420.10383959255321779No Hit
CCTACGGGGGGCAGCAGATGTGGATTAGATACCCTAGTAGTCCTGTCTCT420.10383959255321779No Hit
CCTACGGGTGGCAGCAGATGTGGATTAGATACCCGAGTAGTCCTGTCTCT420.10383959255321779No Hit
CCTACGGGTGGCAGCAGACGAGGATTAGATACCCTGGTAGTCCTGTCTCT420.10383959255321779No Hit
CCTACGGGCGGCTGCAGATGTGGATTAGATACCCTGGTAGTCCTGTCTCT420.10383959255321779No Hit
CCTACGGGCGGCAGCAGTGGGGAATCTTGCGCAATGGGCGAAAGCCTGAC410.1013672213019507No Hit
CCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGAT410.1013672213019507No Hit
CCTACGGGGGGCAGCAGATGTGGATTAGATACCCGTGTAGTCCTGTCTCT410.1013672213019507No Hit
CCTACGGGCGGCAGCAGATGTGGATTAGATACCCCGGTAGTCCTGTCTCT410.1013672213019507No Hit
CCTACGGGTGGCTGCAGTAGGGAATCTTCGGCAATGGGGGCAACCCTGAC410.1013672213019507No Hit
CCTACGGGAGGCTGCAGATGTGGATTAGATACCCGAGTAGTCCTGTCTCT410.1013672213019507No Hit
CCTACGGGGGGCAGCAGACGAGGATTAGATACCCCGGTAGTCCTGTCTCT410.1013672213019507No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGAT410.1013672213019507No Hit
CCTACGGGGGGCAGCAGATGTGGATTAGATACCCTTGTAGTCCTGTCTCT410.1013672213019507No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)