FastQCFastQC Report
Sat 2 Sep 2023
EGAF00008123013

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008123013
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39476894
Sequences flagged as poor quality0
Sequence length154
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG16819124.260497292416166No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG578180.14646035729153364No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT415950.10536543224499882No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGG395730.1002434487373804No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)