FastQCFastQC Report
Sun 12 May 2024
EGAF00008123024

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008123024
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37583053
Total Bases5.7 Gbp
Sequences flagged as poor quality0
Sequence length154
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGCAGAAGACGGCATACGAGATCGGAAGAGCACACGTCTGAACTCCAG942300.25072470828806803Illumina Multiplexing PCR Primer 2.01 (100% over 30bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)