FastQCFastQC Report
Sat 2 Sep 2023
EGAF00008123165

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008123165
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50756938
Sequences flagged as poor quality0
Sequence length35-93
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN7302911.4388003468609551No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1444270.28454632152948234No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)