FastQCFastQC Report
Thu 31 Aug 2023
EGAF00008123512

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008123512
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31246870
Sequences flagged as poor quality0
Sequence length10
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTTGCAGC3086506898.77811121561936No Hit
NTCTTGCAGC1175700.3762616863705069No Hit
ATCTTGCAGA925840.2962984772554819No Hit
ATCTAGCAGC321210.10279749619721912No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)