FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008124371

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008124371
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112
Total Bases16.2 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGATTCAAGTGCTACACCTTGTAGAACCATGTCGTCA3833.92857142857143No Hit
TGCTGATCATTGTTGCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCA3733.035714285714285No Hit
TGCTGATCACTGTTGATTCAAGTGCTACACCTTGTAGAACCATGTCGTCA98.035714285714286No Hit
TGCTGATCATTGTTGCTTTAAGTGCTACACCTTGTAGAACCATGTCGTCA43.571428571428571No Hit
TGTTGATCAAGTGCTACACCTTGTAGAACCATGTCGTCAGTGTAGATCTC21.7857142857142856No Hit
TGCTGATCACTGGTGATTCAAGAGCTACACCTTGTAGAACCATGTCGTCA10.8928571428571428No Hit
TGCTGATCATTGTTTCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCA10.8928571428571428No Hit
TGCTGATCATTGTTGCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCT10.8928571428571428No Hit
TGCTGATGATTGTTGTTTCAAGTGCTAGACCTGGTAGAACCATGTAGTCA10.8928571428571428No Hit
TGCTATCATTGTTGCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCAG10.8928571428571428No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAGGTCTGGAGTATTTCCTC10.8928571428571428No Hit
TGCTGATCATTGTTGCTTTACGTGCGACACCTTGTAGAACCATGTCGTCA10.8928571428571428No Hit
TGCTGATCATTGTTGGTTCAAGTGCTACACCTTGTAGAACCATGTCGTCA10.8928571428571428No Hit
TGCTGATCATTGTTGCTTCTAGTGCTACACCTTGTAGAACCATGTCCTCA10.8928571428571428No Hit
TGCTGATCACTGTTGATTCAAGTGCTACCCCTTGTAGAACCATGTCGTCA10.8928571428571428No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.8928571428571428No Hit
TGCTGATCTGTTGCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCAGT10.8928571428571428No Hit
TGCTGAGAATGTTGGTTTGGGGGTGTGGTTTTGGGGCGCCCCCGCCGCCG10.8928571428571428No Hit
TGCTGATCATTGTTGCTTCAAGTGATACACCTTGTAGAACCTTGTCGTCA10.8928571428571428No Hit
TGCTGATCATTGTTGATTCAAGTGTACACCTTGTAGAACCATGTCGTCAG10.8928571428571428No Hit
TGCTGATCATTGTTGCTTCAAGTGCTACACCTTGTAGNACCATGTCGTCA10.8928571428571428No Hit
TGCTGATCATAGTTGCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCA10.8928571428571428No Hit
TGCTGATCATGTTGCTTTAAGTGCTACACCTTGTAGAACCATGTCGTCAG10.8928571428571428No Hit
TGCTGATCATTGTTGCTTTGAGTGCTACACCTTGTAGAACCATGTCGTCA10.8928571428571428No Hit
TACTGATCATTGTTGCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCA10.8928571428571428No Hit
TGCTGATCATTGTTGCTTCAAGTGCTACACCTTGTTGAACCATGTAGTAA10.8928571428571428No Hit
TGCTGATCATTGTTGCTTTAAGTGCTACACCTTGTAGATCCATGTCGTCA10.8928571428571428No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)