FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008125025

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008125025
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences169
Total Bases24.5 kbp
Sequences flagged as poor quality0
Sequence length145
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGATTCAAGTGCTACACCTTGTAGAACCATGTCGTCA7343.19526627218935No Hit
TGCTGATCATTGTTGCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCA5733.72781065088758No Hit
TGCTGATCACTGTTGATTCAAGTGCTACACCTTGTAGAACCATGTCGTCA148.284023668639055No Hit
GCTGATCATTGTTGATTCAAGTGCTACACCTTGTAGAACCATGTCGTCAG21.183431952662722No Hit
TGCTGATCATTGTTGCTTTAAGTGCTACACCTTGTAGAACCATGTCGTCA21.183431952662722No Hit
TGCTGATCATTGTTGATTAAGTGCTACACCTTGTAGAACCATGTCGTCAG10.591715976331361No Hit
TGGTGAGCATTTTTGCTTCCAGTGCTACGCCTTGTAGATCCATGTCGGGA10.591715976331361No Hit
TGCTGATCATTGTTGATACAAGTGCTACACCTTGTAGAACCATGTCGTCA10.591715976331361No Hit
TGCTGATCATTGTTGCTTCAAGTGCTACACCTTGTGGAACCATGTCGTCA10.591715976331361No Hit
TGCTGATCAATGTTGCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCA10.591715976331361No Hit
TGCTGATCATTGTTGATTCAAGTGTTACACCTTGTAGAACCATGTCGTCA10.591715976331361No Hit
TGCTGATCATTGTTGATTCAAGTGCTACACCTTGTAGAATCATGTCGTCA10.591715976331361No Hit
TGCTGATCATTGTTGCATCAAGTGCTACACCTTGTAGAACCATGTCGTCA10.591715976331361No Hit
TGCTGATCATTGTTGATTCAAGTGCTAAACCTTGTAGAACCATGTCGTCA10.591715976331361No Hit
TGCTGATATTGTTGCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCAG10.591715976331361No Hit
TGCTGATCATTGTTGCATCAAGTGCACACCTTGTAGAACCATGTCGTCAG10.591715976331361No Hit
TGCTGATGATTGTTGATTCAAGTGCTACACCTTGTTGAACCATGTCGTCA10.591715976331361No Hit
TGCTGATCATTGTTGATTCAAGTGCTACACCTTGAAGAACCATGTCGTCA10.591715976331361No Hit
TGCTGATCATTGTTGATTCAAGTCTACACCTTGTAGAACCATGTCGTCAG10.591715976331361No Hit
TGCTGATCATTGTTGATTCAAGTGCAACACCTTGTAGAACCATGTCGTAA10.591715976331361No Hit
TGCTGATCATTGTTGATTCAATGCTACACCTTGTAGAACCATGTCGTCAG10.591715976331361No Hit
TGCTAACATTTTTTAATAAAGTTCAACACCTTGTATAACCAATTAGTAAA10.591715976331361No Hit
TGCTGATCATTGTTGCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCG10.591715976331361No Hit
TGCTGATCATTGTTGGTTTTGGGGCTTGTCCTTGTAGAACCATGTCGGCC10.591715976331361No Hit
TGCTGATCATTGTTGCTTCAAGTCTACACCTTGTAGAACCATGTCGTCAG10.591715976331361No Hit
TGCTGATCAGTGTGGCTTCAAGTGCTACACCTTGTAGAACCATGTCGTCA10.591715976331361No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)