FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008125335

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008125335
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences911
Total Bases132 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC58564.21514818880351No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA768.342480790340286No Hit
TGCTGATCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA363.951701427003293No Hit
TGCTGATCACTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA70.7683863885839737No Hit
TGCGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT70.7683863885839737No Hit
TGCTGTCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT60.6586169045005488No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAGGTCTGGAGTATTTCCTC50.5488474204171241No Hit
TGCTGATATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT50.5488474204171241No Hit
TGCTGATCATTGTTGCTTTGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT40.43907793633369924No Hit
TGCTGATCATTGTTGCTTTGGGGGCGAGGAAAAGTCTGGAGTATTTCCTC40.43907793633369924No Hit
GCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT40.43907793633369924No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATCTCCTC30.3293084522502744No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTACCTC30.3293084522502744No Hit
TGCTGATCATTGTTGCTTTGGGGGTGGGGAAAAGTCTGGAGTATTTCCTC30.3293084522502744No Hit
TGTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT30.3293084522502744No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAGAGTCTGGAGTATTTCCTC30.3293084522502744No Hit
TGCTGATCATTGTTGCTTTGGAGGTGAGGAAAAGTCTGGAGTATTTCCTC30.3293084522502744No Hit
TGCTGATCATTGTTGATTCAAGTGCGTGTGATGTAGAACCATGTCGTCAG30.3293084522502744No Hit
TGCTGATCATTGTTGTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT30.3293084522502744No Hit
TGCTGATCATTGTTCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.21953896816684962No Hit
TGCTGATCATTGTTGTTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC20.21953896816684962No Hit
TGCTGATCATTGTTGCTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.21953896816684962No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGCATTTCCTC20.21953896816684962No Hit
TGCTGATCATTGTTGCTTCAAGTGCTGTGAGATGTAGAACCATGTCGTCA20.21953896816684962No Hit
TGCTGATCATTGGTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC20.21953896816684962No Hit
TGCTGATCATTGTAGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC20.21953896816684962No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGCCTGGAGTATTTCCTC20.21953896816684962No Hit
TGCTGATCTTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.21953896816684962No Hit
TGCTGATCATTGTTGATTCAAGTCTGTGTGATGTAGAACCATGTCGTCAG20.21953896816684962No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTA20.21953896816684962No Hit
TGCTGATCAATGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC20.21953896816684962No Hit
TGCTGATCATTGTTGCTTTGGGGATGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTCATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCAGTACATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTAGGTG10.10976948408342481No Hit
TGCNGATATTGTTGNNNNNNNNNNNNNNNAAAGTCNNNNGTATTTACTCT10.10976948408342481No Hit
TGCTGATCGTTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.10976948408342481No Hit
TGCTGATCTTTGTTGATTCAAGTGCTGTGTGATGTAGTACCATGTCGTCA10.10976948408342481No Hit
TGCTGATCATTGTTGCTTCAAGTCTTTGTGATGTAGAACCATTTCGTCAT10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTCCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGTTGAAGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGTGGGGGGGGGCGCCGCGCGGGCGGGCCAGACGGGCGTGGACACTG10.10976948408342481No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGACGTCA10.10976948408342481No Hit
TGCTGATCATTGTGCTTTGGGGGTGAGGAAAAGTCTGGTGGATTTCCTCT10.10976948408342481No Hit
TGCTGATCATAGTTGCTTTGGGGGTGAGGAAAAGTCAGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGACTTGAGTAATTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGTAGCAGAGACTTGGTCTTTCGCCTGAT10.10976948408342481No Hit
TGCTGATCATTGTTACTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGTGGGTGAGGAAAAGTCTGGAGTGTTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTATGGAGTAATTCCTC10.10976948408342481No Hit
TACTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTATGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGATTCAAGTGGGGGGGGGGCCGCGGGGCCCGCGGCG10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGTGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTTCTC10.10976948408342481No Hit
GCTGACATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCTT10.10976948408342481No Hit
TGCTGATCATGGTTGCTTTGGGGGTGAGGAAAAGTCGGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTTCTTTGGGGGTGAGGAAGAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGGTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTG10.10976948408342481No Hit
TGCTGATCATTGTTGATTTGGGGGTGAGGGAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCGGATCATTGTTGCTTTGGGGGTCAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCAGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGACTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTGCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.10976948408342481No Hit
TGCTGTTCAGACTAGTAACCCCCGGCCGGGCGGGGCCCCCCCGGGGGGGG10.10976948408342481No Hit
TGCTGATCATTGTTGCTTCAAGTGATGTGTGATGTAGAACCATTTCGTCC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGGTGAGGAAAAGTCTGGAGTATTTCCT10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCCGGAGTATTTCCTC10.10976948408342481No Hit
TGCGGATCATTGTTGATTCAATTGCTGTGTGATGTAGAACCATGTCGTGA10.10976948408342481No Hit
TGCTGATCATTATTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGATGCATTGTGGGTGAGAAAAAGACTGTAGTATATACAC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAATATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGTGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTGGGGGGGGAGGAATAGTCTGGAGTATTTCCTG10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTGCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGACTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTGTTTCCTC10.10976948408342481No Hit
TGCTGATCATTGATGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCATC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGAAGTATTTCCTC10.10976948408342481No Hit
TGGTGTTGTTTGTTGGTGGTGGTTGTTGTTGTGTTGGTGTTGTTGGAAGA10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGGAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTCGGGGGAGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTAATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.10976948408342481No Hit
TGCTGATCATTGTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTAATTGCTC10.10976948408342481No Hit
TGCTGATCATTGTTGATCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.10976948408342481No Hit
TGCGTCTCCGTTGGGTGGGTGGTGGTGGTGTGGGGGGGTTTGGTGGTGGT10.10976948408342481No Hit
TGCTGATCATTGTTGCTATGGGGGTGAGGAAAAGTCTGGAGTATTACATC10.10976948408342481No Hit
AGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATATCCTC10.10976948408342481No Hit
TGCTGATCATTGGTGCTATGGGCGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGTCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.10976948408342481No Hit
TGCTGATCATTGTTGCTTCAAGTGCGTGTGATGTAGAACCATGTCGTCAG10.10976948408342481No Hit
TGCTGTCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATATCCTCT10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGAAAAGTCTGGAGTATTTCCTCT10.10976948408342481No Hit
TGCTGATCATTGTTGGTTTGTGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATAGTTGATTCAAGTGATGTGTGATGTAGAACCATGTCGTCA10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCAGGAGTATTGCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGATCCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.10976948408342481No Hit
TGCTGATCATTGTTGCTATGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCGGATCATTGTTGCTTTGGGTGTCAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTTCTTTGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.10976948408342481No Hit
TGCTGATCATTGTTGGTTTAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.10976948408342481No Hit
TGCTGCTCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGGTGTTGTTTGTTGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.10976948408342481No Hit
GGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTTTAGTATTTCCTC10.10976948408342481No Hit
TGCTTGGGATAAAAGTCCCTGACTTATGGAAAAACTTTGTCAAAGCCACT10.10976948408342481No Hit
TGCTGATCATTTTTTCTTTGTGGGTTAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGAAGAACCATGTCGTCA10.10976948408342481No Hit
TGCTGATCATTGTTGCTTCAAGTGATGTGTGATGTAGAACCATGTCGTCA10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCANN10.10976948408342481No Hit
TCCAGAANATTGTTGATTTGGGGGTGACGAAAACTCTGGAGTATTTCCTG10.10976948408342481No Hit
TGCTGACATTGTTGCTTGGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.10976948408342481No Hit
TGTTGATCAAGTGCTGTGTGATGTAGAACCATGTCGTCAGTGTAGATCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTCGGGGTGAGGAAAAGTCTGGAGTATTTGCTC10.10976948408342481No Hit
TGCTGACATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.10976948408342481No Hit
AGCTGATCATAGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGTGGGTGAGGAAAAGTCTGGAGTATTTCATC10.10976948408342481No Hit
TGCTGATCATTGAAGCTTTGGGGGTGAGGAAAAGTCATGAGAATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCTTC10.10976948408342481No Hit
TGCTATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.10976948408342481No Hit
TGCTGATCATTGGTGCTNTGGGGGTGAGGAAAAGTCTGGAGTATTTGCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGGGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGAGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGACCCATGTCGTCA10.10976948408342481No Hit
TGCGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.10976948408342481No Hit
TGCTGATCATAGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGGATTTACTAT10.10976948408342481No Hit
TGCTGATCATTGTTGATTAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.10976948408342481No Hit
TGCTGAACATTGTTGGTTTGGGGGTGAGGAAACGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATCGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGACCACTATTGAATCAATTACAGGGGGGTGTAGAAACCGGTAGGGG10.10976948408342481No Hit
TGCTGATCGTTGTTGCTTCAAGTACTGTGTGATGTAGAACCATGTCGTCA10.10976948408342481No Hit
TGCTGATCATTGNTGCTNTGGGCGTGAGGAAAAGTCTGGAGTATTTGCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTCATGAAAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACATGTCGTCAG10.10976948408342481No Hit
GCTGATCACTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAATGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCAATAGTGCTTTGGGGGAGAGGAAAAGACTGGAGTATTTCCAA10.10976948408342481No Hit
TGCTGATCATTGTTGTTTCAAGTGCTGTGTGATGTAGAAGCATGTAGTCA10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTG10.10976948408342481No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTAGTCA10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGACAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCCTTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTA10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGTGAGGAAAATTAAGGAGTTTTTACAAT10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAGAAGTCTGGAGTATTTCCTC10.10976948408342481No Hit
TGCTGATCATTGTTGCTTCACGTGATGTGTGATGTAGAAACATGTCGAAA10.10976948408342481No Hit
TGCTGATCATTGTTGCTGGTTTTGAGGGAGATGTGAACTCTGGGATGGTT10.10976948408342481No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTATGGAGTATTTACTC10.10976948408342481No Hit
TGCTGATCATTGTTGCATTGGGGGTGAGGAAAAGTCAGGAGTATTTCCTC10.10976948408342481No Hit
TGCTATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTACTTCCTCT10.10976948408342481No Hit
TGCTGATCATTGTTAATTTGGGGGTGAGGAAAAGTCTGGAGTATTGACTC10.10976948408342481No Hit
TCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.10976948408342481No Hit
TGCAGAATATTGTTGCTTTGGGGGTGAGGAAACGTCTGGAGTATTTCCTG10.10976948408342481No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)