FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008125793

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008125793
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences364
Total Bases52.7 kbp
Sequences flagged as poor quality0
Sequence length145
%GC62

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA16545.32967032967033No Hit
TGCTGATCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10729.395604395604398No Hit
TGCTGATCACTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA143.8461538461538463No Hit
TGTTGATCAAGTGCTGTGTGATGTAGAACCATGTCGTCAGTGTAGATCTC30.8241758241758242No Hit
TGCTGATCATTGTTGCTTCACGTGCGGTGTGATGTAGAACCATGTCGTCA20.5494505494505495No Hit
TGCTGATCATTGTTGCTTCAAGTCTGTGTGATGTAGAACCATGTCGTCAG20.5494505494505495No Hit
TGCTGATCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTAGTCA20.5494505494505495No Hit
TGCTGATCATTTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGTC20.5494505494505495No Hit
TGCTGATCATTGTTGATTAAGTGCTGTGTGATGTAGAACCATGTCGTCAG20.5494505494505495No Hit
TGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAGTGTAGATCT20.5494505494505495No Hit
TGCTGATCTTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG20.5494505494505495No Hit
TGCTGATACAAGTGCTGTGTGATGTAGAACCATGTCGTGTGTGTTGAAGA10.27472527472527475No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTACATCAATGTCGTCA10.27472527472527475No Hit
TGCTGATCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTAGTAA10.27472527472527475No Hit
TGCTGATCATTCTAGATTCAAGTGCTGAGAGATGTAGCACCATGTCGACA10.27472527472527475No Hit
TGCAGATCAATTTTTATTAAAGTGCTGTGTGATGTAGAACCATGTAGTCA10.27472527472527475No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGATCAATGTCGTCA10.27472527472527475No Hit
TGCTGATAATACATGATTAAAGTGCTGTGTGATGTAGAACCATGTCTTAA10.27472527472527475No Hit
TGCTGATCACTGTTGATTCAATGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGATATTGTTGTTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGATCATTGTTGCTTCAAGTGCGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGATCATTGTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGTGTTGTTTGTTGTTTGGGGGGGGGGGTGGGGGGGGTTTTGTGTTGGGG10.27472527472527475No Hit
TGCTGATATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAGTGTAGATCT10.27472527472527475No Hit
TGCAGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.27472527472527475No Hit
TGCTATCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGATCATCTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTC10.27472527472527475No Hit
TGCTGATCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGACTTCA10.27472527472527475No Hit
TGCTGTTGTTTGTTGGTTGTTGTGGTGTGTGTTGTTGTTGGTTGTGGTGT10.27472527472527475No Hit
TGCTGATCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGCAG10.27472527472527475No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGAAGAACCATGTCGTCA10.27472527472527475No Hit
TGCTGATGATTGTTGATTCAAGTGCTGTGTGATGTTGAACCATGTCGTCA10.27472527472527475No Hit
TGCTGATCTTGTTGCATCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCAGATCATTGTTGATTCAAGTGCTGTGTGATCTAGATCCATGTCGTCA10.27472527472527475No Hit
TGCTGATCAATGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.27472527472527475No Hit
TGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN10.27472527472527475No Hit
TCTGATCACTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGATCATTGTTGCTTCAAAGTGCTGTGTGATGTAGAACCATGTCGTC10.27472527472527475No Hit
TGCTGATCATTGTTGATTCAATGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGATCATTGTTGATTCAAGTGTGTGTGATGTTGAACCATGTCGTCAG10.27472527472527475No Hit
TGTTGATTCAAGTGCTGTTTGATGGAGAACCTTGTCGTCAGTGTAGATCT10.27472527472527475No Hit
TTCTGATCATTGATGAAAAAATTGCTGTGTGATGTAGAACCATGTCTTCA10.27472527472527475No Hit
TGCTGATCATTGCTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.27472527472527475No Hit
TGCTGATCATTGTTGCTTTGTGATGTAGAACCATGTCGTCAGTGTGATTC10.27472527472527475No Hit
TGCTGATCATTGTTGCTTCGTGCTGTGTGATGTAGAACCATGTCGTCAGT10.27472527472527475No Hit
TGCTGATCATTGTTGGTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.27472527472527475No Hit
GCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGATCATAGTTGCTCAAGTGCTGTGTGAAGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGTCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGATCATTGTTGCTTCAAGGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTCATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.27472527472527475No Hit
TGCTATATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAGT10.27472527472527475No Hit
TGCTGATCATTGTTGCTTTGTGATGTAGAACCATGTCGTCAGTGCTGTTG10.27472527472527475No Hit
TGCTGATCATTTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTC10.27472527472527475No Hit
TGCGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGATCATTGTTGATTAAAGTGGTGTGTGTTGTAGAACCATGTCGTCT10.27472527472527475No Hit
TGCTGATCATTGTTGCATCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.27472527472527475No Hit
TGCTGATCACTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTAA10.27472527472527475No Hit
TGCTGATCATTGTTGATTCAAGTGATGTGTGATGTAGAACCATGTCGTCA10.27472527472527475No Hit
TGCTGATCAATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTC10.27472527472527475No Hit
TGCTGATCATTGTTGATTCAAGTGATGTGAGATGTAGAACAATGAAGTCA10.27472527472527475No Hit
TGCTGATCATTGTTGCTTACGTAGCAGAGACTTGGTCTTTCGGCTGTTGA10.27472527472527475No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTAGTCA10.27472527472527475No Hit
TGCGGATCATTGTTGTTTGTTGTGGTGTGTGATGTTGTTCCATGTCGTCA10.27472527472527475No Hit
TGCTGATCATAGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.27472527472527475No Hit
TGAAGATGATTGTTGGTACAAGTGCTGTGTGAGGAAGAGCCATGTAGACT10.27472527472527475No Hit
TGCTGATCATTTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.27472527472527475No Hit
TGCTGATCATTGTTGATTCAAGTGGTGTGTGTTGTAGAACCATGTCGTCT10.27472527472527475No Hit
TGCTGATCACTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGACA10.27472527472527475No Hit
TGCTGATCATTGTTGCTTCAAGTCTGTGTGATGTAGAACCATGTCGTCGG10.27472527472527475No Hit
TGCGGATCATTGTTGATAGTTGACGTGACTGATGTTGTTCCATGTCGTCA10.27472527472527475No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)