FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008125795

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008125795
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences243
Total Bases35.2 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC62

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA13254.32098765432099No Hit
TGCTGATCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA5422.22222222222222No Hit
TGCTGATCACTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA52.05761316872428No Hit
TGCTGATCATTGTTGCTTCAAGTGCTGTGTGATGAAGAACCATGTCGTCA20.823045267489712No Hit
TGCTGATCATTGTTGATTCAATGCTGTGTGATGTAGAACCATGTCGTCAG20.823045267489712No Hit
TGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAGTGTAGATCT20.823045267489712No Hit
TGCTGATCAAGTGCTGTGTGATGTAGAACCATGTCGTCAGTGTAGATCTC20.823045267489712No Hit
TGTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAGCCATGTCGTCAG10.411522633744856No Hit
TGCAGATCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGACGTCA10.411522633744856No Hit
TGTTGATCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.411522633744856No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCAAGTCGTCA10.411522633744856No Hit
GGCTGATCATTGTTGCTTCAAGTGCTGTGTGATGTAGCCCCATGTCGTCA10.411522633744856No Hit
TGCTAATCACTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.411522633744856No Hit
TGCTGTCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.411522633744856No Hit
TGCTGATCATTTTTGATACAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.411522633744856No Hit
TGCTGATCATTGTTGATTCAAGTGCTTTGTGATGTAGATCCATGTCGTCA10.411522633744856No Hit
TGCTGATCAAATTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.411522633744856No Hit
TGTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.411522633744856No Hit
TGCAGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.411522633744856No Hit
TGCTGATCATTGTTGGTTAAAGTGCTGTGTGATGTAGAACCATGTCGTCT10.411522633744856No Hit
TGCGGATCATTGTAGTAACTTGTGGAGTGTGATGTTCATCCATGTCGTAA10.411522633744856No Hit
TGCTGATCATGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.411522633744856No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCAATGTCGTC10.411522633744856No Hit
TGCTGATCATTGGTGCTACAAGAGCTGTGTGATGTAGAACCATGTCGTCA10.411522633744856No Hit
TGTTGATTCAAGTCCTGTGTGATGTAGAACCATGTCGTCAGAGTTTATCT10.411522633744856No Hit
AGCTGATCATTGTTGCTTCAAGAGCTCTGTGATGTAGAACCATGTCGTCA10.411522633744856No Hit
TGCTGATCATTGTTGCTTCAAGTCTGTGTGATGTAGAACCATGTCGTCAG10.411522633744856No Hit
TCTGATCACTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.411522633744856No Hit
TGCTGATCATTGTTGCTATGCGGTAGCAGAGACTAGGTCTTTCGGTTGTT10.411522633744856No Hit
TGCTGATCATTGTTGCTACAAGTGCTGTGAGATGTAGAACCATGTCGTCA10.411522633744856No Hit
TGCTGATCATGTTGCTTCAAGTACTGTGTGATGTAGAACCATGTCGTCAG10.411522633744856No Hit
TGCTGATCATTGTTGCTTCAAGTGCTGTGTGATGTAGAACCATGTAGTCA10.411522633744856No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGACCATGTCGTCAG10.411522633744856No Hit
TGCTGATCATTGTTGTTTCAAGTGGTGTGTGATGTAGAACCATGTCGTCT10.411522633744856No Hit
ACGTTGATTGGGTGGCGTAACTTGGGGTGGGGGGGTGGGCCGGGGCGGCC10.411522633744856No Hit
TCCTGATGATTGTTGTTTCAAGTGCTGTGTGAGCTAGAACCATGTAGAAT10.411522633744856No Hit
TGCTGATCATTGTTGTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.411522633744856No Hit
TGCTGATCATTGTTGCTTTGTGATGTAGAACCATGTCGTCAGTGCTGTTG10.411522633744856No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGCACCATGTCGTCA10.411522633744856No Hit
TGCTGATCATTGTTGATTAAAGTGGTGTGTGTTGTAGAACCATGTCGTCT10.411522633744856No Hit
TGCTGATCACTGTTGAATCAACAGCTGTGTGATGTAGAACCATGTCGTCA10.411522633744856No Hit
TGCTGATCATTGTTGATTCAAGTACTGTGTGATGTAGAACCATGTCGTCA10.411522633744856No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCTTCA10.411522633744856No Hit
TGCTGATCATTGATGATTCAAGTGCTGAGTGATGTACATCCATGTCGTCA10.411522633744856No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTAGTCA10.411522633744856No Hit
TGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCC10.411522633744856No Hit
TGCTGATCATTGTTGTTTCAAGTGCTGTGTGATGTAGAACCATGTCGTCA10.411522633744856No Hit
TGCTGATCTTGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAG10.411522633744856No Hit
GGCTGATCATTGTTGATTCAAGTGCTGTGTGATGTAGCCCCATGTCGTCA10.411522633744856No Hit
TGCTGTCATTGTTGATTCAAGTGCTGTGTGATGTAGATGCATGTCGTCAG10.411522633744856No Hit
TGTGATCATGTTGATTCAAGTGCTGTGTGATGTAGAACCATGTCGTCAGT10.411522633744856No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)