FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008125799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008125799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences503
Total Bases72.9 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC34568.58846918489066No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCA173.3797216699801194No Hit
TGCTGATCATTGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCA152.982107355864811No Hit
TGCTGATCATTGTTGCTTTGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT81.5904572564612325No Hit
TGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAGTGTAGATCT61.1928429423459244No Hit
TGCTGATATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT50.9940357852882704No Hit
TGTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT40.7952286282306162No Hit
TGTTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC30.5964214711729622No Hit
TGTTGATCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAGTGTAGATCTC30.5964214711729622No Hit
TGCTGATCTTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT30.5964214711729622No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTACTTCCTC20.3976143141153081No Hit
TGCTGTCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.3976143141153081No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTCGTGTGTAGAACCATGTCGTCAG20.3976143141153081No Hit
TGCTATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.3976143141153081No Hit
TCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.3976143141153081No Hit
TGCTGATCATTTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.3976143141153081No Hit
GCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.3976143141153081No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAGAGTCTGGAGTATTTCCTC20.3976143141153081No Hit
TGCTGATCACTGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCA20.3976143141153081No Hit
TGCTGATCAATGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC20.3976143141153081No Hit
TGCCGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC20.3976143141153081No Hit
TGCTGATCATTGATGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC20.3976143141153081No Hit
TGCTGATCATTGTTGCTTTGGGGATGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGACCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGATGTGAACTCTGGGATGGTTGTGT10.19880715705765406No Hit
TGCTGATCATTTTTGCTTTGGGGGAGAGGAAAAGACTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGAAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTATTGTGGTGAGGAAAAGTCTGGAGTATTTCCTA10.19880715705765406No Hit
TGCTGATGATTGTTGTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.19880715705765406No Hit
TGCGGATCATTGATCGTTTGGGCCTCTCGAAAAGTGTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGCCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATCTCCTC10.19880715705765406No Hit
TGTGATCATTGTTGCTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAG10.19880715705765406No Hit
TGCGGATCATTGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTGA10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCAGC10.19880715705765406No Hit
TGCTGATAATTGTTGATTAGGGGGTGAAGAAAAGTCTGGAGTATTTCATC10.19880715705765406No Hit
TCCTGAACATTGTGCATTGGTGGTGAGCAAAAGTCTGGAGTATTTCCTCT10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTTGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGAATTTCCTC10.19880715705765406No Hit
TGCTGTACTAAGATGCAACCCCGGCCCGGCCCCGCCCAACACAGGTCGGC10.19880715705765406No Hit
TGCTGATCATTCTAGCTTAGGTGGTCAGGAAAAGTCTGGACTATTACCTC10.19880715705765406No Hit
TGCTATCATTGTTGCTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAG10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGCGGCCCCCCCCGCCGGCGGCGCCCCCC10.19880715705765406No Hit
TCTATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCTT10.19880715705765406No Hit
TGCTGATCATTGGTGCTACTAGTCTTTCGTGTGTAGAACCATGTCGTCAG10.19880715705765406No Hit
TGCGATCATAGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.19880715705765406No Hit
TGCTGATCATTGTTGATTCAAGTCTTTCGTGTGTAGAACCATGTCGTCAG10.19880715705765406No Hit
TGCTGACATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.19880715705765406No Hit
TGCTGATCTTTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TTGCTGATCTTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCATTGGGGGTGAGGAAAAGTCTTGAGTATATCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCT10.19880715705765406No Hit
TGCTGATCATTGTTTCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTGGGGGTGAGGGAAAGTCTGGAGTATTTCCTCT10.19880715705765406No Hit
TGCTGATCATTGTTGATCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAG10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGAGTGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGATGATTCAATTGCTTTATAGTAAAGAACCATATCTTCA10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCACGAGTATTTCCTC10.19880715705765406No Hit
TGCAGATCAATGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATATTGTTGCTTTGGGGGCGAGGAAAAGTCTGGAGTATTTCCTCT10.19880715705765406No Hit
TGCTGATGATTGTTGTTTCAAGTGCTTTCGTGGGTAGAACCATGTCGTCT10.19880715705765406No Hit
TGCGGATCATTGTTCCAAAGCCCCAGACCAAAAGTGACCAGTATTTCCTC10.19880715705765406No Hit
TGCTAATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCAATGTTGCTTTGGGGGTGAGGAAAAGACTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGTTTGTTGTGCTTTGGTGTGTTGATCCATGTCGTCA10.19880715705765406No Hit
GCTGAACATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTCGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGTAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGTTGAAAGATGCAATCCGCTCCCCGTCCCCCCCCCCCCCCGCGGCG10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCAC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGNCTGGAGTATTTNCTC10.19880715705765406No Hit
TGCAGAACAATGTAGCATTCGGGGTGAAGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAATATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTA10.19880715705765406No Hit
TGCTGATCATTGATGCTATGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGTGGTGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
GGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGCGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTTGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTATGAGGGTGAGGAAAAGTCTGGAGTATTACCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCGTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTGTTTCCTC10.19880715705765406No Hit
TGCTGATCATTGATTCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGAAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCT10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAGAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit
TGCTGATCATTGTTGTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.19880715705765406No Hit
TGCTGATCATGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.19880715705765406No Hit
TGCTGATCATTGATGCTTTGGGGGTGAGGAAAAGTCTTGAGTATATCCTC10.19880715705765406No Hit
GCTGATCATTGTTGCTTTGGGGGTGAGGAAAGTCTGGAGTATTTCCTCTT10.19880715705765406No Hit
TGCTGATCATTGTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT10.19880715705765406No Hit
TTGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCT10.19880715705765406No Hit
TGCTGATCATTGTTGCTTTGGGGGAGAGGAAAAGTCTGGAGTATTTCCTC10.19880715705765406No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)