FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008126043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008126043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3
Total Bases434 bp
Sequences flagged as poor quality0
Sequence length144-145
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGTACTTTGTTGCTTTGGGGGTGACCATAACAGTGCTGATTATGGAC133.33333333333333No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC133.33333333333333No Hit
TGCTGATCATAGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC133.33333333333333No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)