FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008126441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008126441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences268
Total Bases38.8 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC62

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCA8130.223880597014922No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCA6524.253731343283583No Hit
TGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAGTGTAGATCT228.208955223880597No Hit
TGCTGATCACTGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCA207.462686567164178No Hit
TGCTGATCATTGTTGCTTTAAGTGCTTTCGTGTGTAGAACCATGTCGTCA51.8656716417910446No Hit
TGTTGATCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAGTGTAGATCTC41.4925373134328357No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC31.1194029850746268No Hit
TTGCTGATCATTGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTC20.7462686567164178No Hit
TGCTGGTCATTGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCA20.7462686567164178No Hit
TGCTGATCATTGTTGCTTTCGTGTGTAGAACCATGTCGTCAGTGTAGATC20.7462686567164178No Hit
TGCTGATCATTGATTCTATGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC10.3731343283582089No Hit
TGTTCATTCAAGTGCTTTAGTGTATAGAACCATGTCGTCATTGTAGATAT10.3731343283582089No Hit
TGATGATCAAGTGCTATATTGTGTAGAACCAAGTCCTCATTGAAAAACTC10.3731343283582089No Hit
TTGCTGATCATTGTTGCTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTC10.3731343283582089No Hit
TCTGATCATTGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAG10.3731343283582089No Hit
TGCTGATCATTGTTGATTCAAGTGCTTTCGAGTGTAGAACCATGTCGTCA10.3731343283582089No Hit
TGTTGAATAAAGTGCTTTCGTGTGTAGAACCATGTCGTCAGTGTAGATCT10.3731343283582089No Hit
TGCTGATCATAGTTGTTTCAATTGCTTTCGTGTGTAGAACCATGTCGTCA10.3731343283582089No Hit
TGTTGATTCAAGTGCTTCGTGTGTAGAACCATGTCGTCAGTGTAGATCTC10.3731343283582089No Hit
TGCTGATCATTGTTGATACAAGTGCTTTCGTGTGTAGAACCATCTCGTCA10.3731343283582089No Hit
TGCTGATCATTGTTGCTTTGGGGGTTACGGAAATGACTGTAGTATTTCAA10.3731343283582089No Hit
TGCTGATCATTGTTGCTTCAAGTGATTTCGTGTGTAGCACCATGTCGACA10.3731343283582089No Hit
TGCTGATCATTGTTGCTTAAAGTGATTTCGAGTCTAGAACCATGACTTCA10.3731343283582089No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTTCGTGTGTAGAACATGTCGTCAG10.3731343283582089No Hit
TGCTGATATTGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAG10.3731343283582089No Hit
TGCTGACCATTGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCA10.3731343283582089No Hit
TGCGGATCATTGTTGCTTCAAGGGCTTTCGTGTGTAGAACCATGTCGTCA10.3731343283582089No Hit
TGCTGATCATTGTTGATTCAAGTGCTTTCGAGTGAAGAACCATTTCGTCA10.3731343283582089No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTTCGTGAGTAGAACCATGTCGTCA10.3731343283582089No Hit
TGCTGATCATTGTTGATTCAAGTGCTTTCGTGTGTAGCCCCATGTCGTCA10.3731343283582089No Hit
TGCTATCATTGTTGCTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAG10.3731343283582089No Hit
TGCTGATCATTGTTGCTTTGGGTGAAAGAGTATGATGGGGTGGTGGTTGT10.3731343283582089No Hit
TGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTAAGTGTAGATAT10.3731343283582089No Hit
TGCTGATCATTGATGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCA10.3731343283582089No Hit
TGCTGATCTTTGTTGATTCAAGTGCTTTCGTGTGTAGTACCATGTCGTCA10.3731343283582089No Hit
TGCTGATCATTGTTGATTCAAGAGCTTTAGTGTGTAGAACCATGTCGTCA10.3731343283582089No Hit
TGCAGATCACTGTTGATTCAAGTGCTTTCGTGTGTAGAACAATGTCGTCA10.3731343283582089No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTCGTGTGTAGAACCATGTCGTCAG10.3731343283582089No Hit
TGCTGATCATTGTTGATTCAAGTCTTTCGTGTGTAGAACCATGTCGTCAG10.3731343283582089No Hit
AACTGATCATAGTTGATACAAGTGCAATCGTGTCTAGAACCATGTAGTAA10.3731343283582089No Hit
TGGTGGGGGGGTGTGGCCGGGGCTGGGGTTTTTGGGGGGGGGGGGGGGGG10.3731343283582089No Hit
TGTTGATTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAGTGTAGATAT10.3731343283582089No Hit
GCTGATCATTGTTGCTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAG10.3731343283582089No Hit
TGCTGATCATTGTTGATTCAAGTGCTTTCGTGTGTAGAACCTGTCGTCAG10.3731343283582089No Hit
TGCTGATCATTGTTGCTACAAGAGCTTTCGTGTGTAGAACCATGTCGTCA10.3731343283582089No Hit
TGCTGATCATTGTGCTTTCGTGTGTAGAACCATGTCGTCAGTGTAGATCT10.3731343283582089No Hit
TGCGGATCATTGTTGCTTTCGTGTGTAGACCATGTCGTCAGTGTAGATGT10.3731343283582089No Hit
GGCTGATCACTGTTGATTCAAGTGCTTTCGTGTGTAGCCACATGTCGTCA10.3731343283582089No Hit
TGCTGTTCATAGTAGGAAACACCGTAAGTGAGTGGCAAAAAATGGGGTGT10.3731343283582089No Hit
TGCTGATCATTGCTGCTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCA10.3731343283582089No Hit
TGCTGATCATTGTTGTTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCA10.3731343283582089No Hit
TGCTGATCATGTTGCATTCGTGTGTAGAACCATGACGTCAGTGTAGATCT10.3731343283582089No Hit
TGCTGATCATTGTTGCTTCAAGTCTTTCGTGTGTAGAACCATGTCGTCAG10.3731343283582089No Hit
TGCTGATCACTGTTGATTCAAGTGCTTTCGAGTGTAGAACCATGACGTCA10.3731343283582089No Hit
TGTTGATTCAAGTGCTTTCGTGTTTAGAACCATGTCGTCAGTGTAGATCT10.3731343283582089No Hit
TGTTGATTGAAGTGCTTTCGTGTGTAGAACCATGTCGTCAGTGTAAATCT10.3731343283582089No Hit
TGTTGATCAAGTGCTTTCGTGTGTAGATCCATGACGTCAGTGTAGATCTG10.3731343283582089No Hit
TGCTGATCATTGTTGATTCAAGTGCTTTAGTGTGTAGAACCATGTCGTCA10.3731343283582089No Hit
TGCTGATATTGTTGCTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAG10.3731343283582089No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTTCGTGTGTAGTACCATGTCGTCA10.3731343283582089No Hit
TGCTGATCTTGTTGCTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAG10.3731343283582089No Hit
TGCTGATCATTGTTGCTTTGGTGTGTAGAACCATGTCGTCAGTGTGTTGA10.3731343283582089No Hit
TGCTGATCATTGTTGCTTTAAGTGATTTCGTGTGTAGATCCATGTAGTCA10.3731343283582089No Hit
TGCTGATCATAGTTGCTACAAGAGCTTTCGTGTGTAGCACCATGTCGTCA10.3731343283582089No Hit
TGCAGAACAATGTTGATTCAAGTGATTTCGTTTGTAGAACCAAGTCGTCA10.3731343283582089No Hit
TGCTGATCATGGGGGCGGCCCGGGCGGGCGGGGGGCGCCCCCGGGCGGCC10.3731343283582089No Hit
TGCTGATCATGTTGCTTCAAGTGCTTTCGTGTGTAGAACCATGTCGTCAG10.3731343283582089No Hit
TGTTGATTCAAGGGCTTNCGTGAGTAGAACCATGTCGTCAGTGTAGTACT10.3731343283582089No Hit
TGCGGATCATTGTTGATTCAAGGGCATTCGTGTGTAGAACCATGTCGTGA10.3731343283582089No Hit
TGCTGATCATTGTTGATTCAAGTGCTTTCGTGTGTAGAACCATCTCGTCA10.3731343283582089No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTTCGTGTGTAGACCATGTCGTCAG10.3731343283582089No Hit
TGTGTTGTTTGTTGATTCAAGTGCTTTCGTGTGTAGAAGCAAGTGGACTC10.3731343283582089No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)