FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008126562

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008126562
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences261
Total Bases37.8 kbp
Sequences flagged as poor quality0
Sequence length145
%GC62

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCACTTGAATCAACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTAC9134.86590038314176No Hit
AGCACTTGAAGCAACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTAC8934.099616858237546No Hit
AGCAACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTACCGTAACGGT124.597701149425287No Hit
AGCACTTGAATCAACAAAGACGAGACCAAGTCTCTGCTACCGTAACGGTG103.8314176245210727No Hit
AGCACTTGAATCAACAGTGATCAGCAAAGACGAGACCAAGTCTCTGCTAC103.8314176245210727No Hit
AGCACTTGATCAACAAAGACGAGACCAAGTCTCTGCTACCGTAACGGTGC83.065134099616858No Hit
AGCACTTGAATCAACGATGATCAGCAAAGACGAGACCAAGTCTCTGCTAC20.7662835249042145No Hit
AGCACTTAAAGCAACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTAC20.7662835249042145No Hit
AGCACTTGAATCAACAATGATCAACAAAGACGAGACCAAGTCTCTGCTAC20.7662835249042145No Hit
AGCAACAATGATCAACAAAGACGAGACCAAGTCTCTGCTACCGTAACGGT20.7662835249042145No Hit
AGCACTTGAATCAACAATGTCAGCAAAGACGAGACCAAGTCTCTGCTACC10.38314176245210724No Hit
AGCACTTGAAGCAACAATGATCAGCAAAGAAGAGACCAACTCTCTGCTAC10.38314176245210724No Hit
AGCACTTGAATCAGCAAAGACGAGACCAAGTCTCTGCTACCGTAACGGTG10.38314176245210724No Hit
AGCACTTGAATCAACAATGATAGCAAAGACGAGACCAAGTCTCTGCTACC10.38314176245210724No Hit
AGCACTTGAATCAACAATGATCAGCAAAGACGAGACCAAGTCACAGCTAC10.38314176245210724No Hit
TGCACTTGAATCAACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTAC10.38314176245210724No Hit
AGCACTTGAAGCAACAATGAACAGCAAAGACGAGACCAAGTCTCTGCTAC10.38314176245210724No Hit
AGCAATTGAATCAACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTAC10.38314176245210724No Hit
AGGACTTGAATCAACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTAC10.38314176245210724No Hit
AGACTTGAATCAACAGTGATCAGCAAAGACGAGACCAAGTCTCTGCTACC10.38314176245210724No Hit
AGCACTTGAAGCAACAATCATCACCAAAGACGAGACCAAGACACAGCAAC10.38314176245210724No Hit
AGCACTTGATCAACAAAGACGAGACCAAGTCACAGCTACCGAAACGGTGC10.38314176245210724No Hit
AGCATTGAAGCAACAATGTCAGCAAAGACGAGACCAAGTCTCTGCTACCG10.38314176245210724No Hit
AGCACCAATGATCAGCAAAGACGAGACCAAGTCTCTGCTACCGTAACGGT10.38314176245210724No Hit
AGCACTTGAAGCAACAATGATCAGCAATGACGAGACCAAGTCTCTGCAAC10.38314176245210724No Hit
AGCACTTGAATCAACAAAGACGAGACAAAGTCTCTGCTACCGTAACGGTG10.38314176245210724No Hit
AGCACTTGAACAACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTACC10.38314176245210724No Hit
AGCACTTGAAGCAACAATGATCAGCAAAAGACGAGACCAAGTCTCTGCTA10.38314176245210724No Hit
AGCACTTGAATCAACAATGATCAGCAAAGACGAGACCAAGACTCTGCTAC10.38314176245210724No Hit
AGCACTTGAAGCAACAATGATCAGCAAAGACGAGACCAAGACTCTGCTAC10.38314176245210724No Hit
AGCACTTGAAGCAACAATATCAGCAAAGACGAGACCAAGTCTCTGCTACC10.38314176245210724No Hit
AGCACTTGAATCAACAGAGATCAGCAAAGACGAGACCAAGTCTCTGCTAC10.38314176245210724No Hit
AGCACTTGAAGCAACAATGATCAGCAAAGACGAGACCAAGTCACTGCTAC10.38314176245210724No Hit
AGCACTTGAATCAACAATATCAGCAAAGACGAGACCAAGTCTCTGCTACC10.38314176245210724No Hit
AGCACTTGAATCAACAATGATCAGCAAGACGAGACCAAGTCTCTGCTACC10.38314176245210724No Hit
AGCACTTGAAGCAACATGATCAGCAAAGACGAGACCAAGTCTCTGCTACC10.38314176245210724No Hit
AGCACTTAATCAACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTACC10.38314176245210724No Hit
AGCACTTGAATCAACAAAGATCAGCAAAGACGAGACCAAGTCTCTGCTAC10.38314176245210724No Hit
AGCACTTGAATCAACAATGATCAGCAAAGACGAGACCAAGACACTGCTAC10.38314176245210724No Hit
AGCACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTACCGTAACGGTG10.38314176245210724No Hit
AACACTTGAATCAACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTAC10.38314176245210724No Hit
AGCATTGAAGCAACAATGATCAGCAAAGACGAGACCAAGTCTCTGCTACC10.38314176245210724No Hit
AGCACTTGAAGCAACAATGTAGCAAAGACGAGACCAAGTCTCTGCTACCG10.38314176245210724No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)