FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008126659

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008126659
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1214
Total Bases176 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC65654.03624382207578No Hit
TGCTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCA15712.932454695222406No Hit
TGCTGATCATTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCGTCA1028.40197693574959No Hit
TGCTGATCACTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCA373.047775947281713No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATCTCCTC60.4942339373970346No Hit
TGTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT50.41186161449752884No Hit
TGCGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT50.41186161449752884No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTACCTC50.41186161449752884No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAGAAGTCTGGAGTATTTCCTC40.3294892915980231No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGCGTATTTCCTC40.3294892915980231No Hit
TGCTGATCTTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT40.3294892915980231No Hit
TGCTGATATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT40.3294892915980231No Hit
TGCTGATCATTGTTGCTTTGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT30.2471169686985173No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTCCCTC30.2471169686985173No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAGGTCTGGAGTATTTCCTC30.2471169686985173No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGGAAAGTCTGGAGTATTTCCTC30.2471169686985173No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGGGTATTTCCTC30.2471169686985173No Hit
TGCTGATCATTGTTGCTTTGGGGGTTAGGAAAAGTCTGGAGTATTTCCTC30.2471169686985173No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTACTTCCTC30.2471169686985173No Hit
TGCTGATTCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTC20.16474464579901155No Hit
TGCTGATCAAAGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC20.16474464579901155No Hit
TGCTGATCATTGTTGCTTTGGGGGTGGGGAAAAGTCTGGAGTATTTCCTC20.16474464579901155No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGAATTTCCTC20.16474464579901155No Hit
TGCTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGAAACATGTCGTCA20.16474464579901155No Hit
TGCTGATCATTGTTCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.16474464579901155No Hit
TGCTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCAGTCGTCAG20.16474464579901155No Hit
TGCTGATCATTGTTGCTTTAAGTGCTCCTCTATGTAGAACCATGTCGTCA20.16474464579901155No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTAGTGCCTC20.16474464579901155No Hit
TGCTGATTCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCT20.16474464579901155No Hit
TGCCGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC20.16474464579901155No Hit
TGCTGATCATTGTTGCTTTGGAGGTGAGGAAAAGTCTGGAGTATTTCCTC20.16474464579901155No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTTGAGTATTTCCTC20.16474464579901155No Hit
TGCTGTCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.16474464579901155No Hit
TGCTATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.16474464579901155No Hit
TGCTGATCATTGTTGATTCAAGTGCTCCTCAATGTAGAACCATGTCGTCA20.16474464579901155No Hit
TGCTGATCATTTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.16474464579901155No Hit
GCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.16474464579901155No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCGTC20.16474464579901155No Hit
TGCTGATCATGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTCT20.16474464579901155No Hit
TCTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCAG20.16474464579901155No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)