FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008126947

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008126947
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences221
Total Bases32 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCA8739.366515837104075No Hit
TGCTGATCATTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCGTCA6428.95927601809955No Hit
TGCTGATCACTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCA198.597285067873303No Hit
TGCTGATCATTGTTGCTTTAAGTGCTCCTCTATGTAGAACCATGTCGTCA31.3574660633484164No Hit
TGCTATCATTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCGTCAG20.904977375565611No Hit
GCTGATCATTGTTGTTTGGTGTGGTGGTGTATGTAGATCCATGTCGTCAG10.4524886877828055No Hit
TGCTGATCATTGTTGATTCAATTGGGCAGGTTTGTACGACCAGGTGGGAA10.4524886877828055No Hit
TGCTGATCACTGTTGATTCAAGTGCTCCTCTATGTAGAATCATGTCGTCA10.4524886877828055No Hit
TTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCAGT10.4524886877828055No Hit
TGCTGTTGTTTGTTGTTTGGGGGGGGGGGGCGGGGGGGGGGGGTGTGGGG10.4524886877828055No Hit
TGCTGATCATTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCTTCA10.4524886877828055No Hit
TGCGGATCATTGTTCATTGTTGTCGTCCTCTATGTTCTTCCATGTCGTCA10.4524886877828055No Hit
TGCTGATCATTGTTGATTCAAGTCTCCTCTATGTAGAACCATGTCGTCAG10.4524886877828055No Hit
TGCTGATCCTTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCGTCC10.4524886877828055No Hit
TGGCTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTC10.4524886877828055No Hit
TGCTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTGT10.4524886877828055No Hit
TGCTGATCATTGTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCAG10.4524886877828055No Hit
TGCTGATCATTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCCTCA10.4524886877828055No Hit
TGCTGATCATTGTTGCTTCAAGTCTCCTCTATGTAGAACCATGTCGTCAG10.4524886877828055No Hit
TGCTGTCATTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCGTCAG10.4524886877828055No Hit
TGCTGATCATTGTTGCTTCAAGTGCTCCTCTATGTAGACCCAGGTCGTCA10.4524886877828055No Hit
TGCTGTGCGGGGCGGCCGCGCGGCCCCCCCCGTGTGGGGGGGGGGGTGTC10.4524886877828055No Hit
TGCAGATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCA10.4524886877828055No Hit
TGCTGATCTTTGTTGATTCAAGTGCTCCTCTATGTAGTACCATGTCGTCA10.4524886877828055No Hit
TGCTGATCATTGTTGATTCAATGCTCCTCTATGTAGAACCATGTCGTCAG10.4524886877828055No Hit
TGCTGATCATTGTTGATACAAGTGCTCCTCTATGTAGAACCATGTCGTCA10.4524886877828055No Hit
TGCTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGGACCATGTCGTCA10.4524886877828055No Hit
TGTGATCATTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCGTCAG10.4524886877828055No Hit
TGCTATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCAG10.4524886877828055No Hit
TGCTGATCATTGTTGATTCAAGAGCTCCTCTATGTAGAACCATGTCGTCA10.4524886877828055No Hit
TGCTGATCATTGTTGATACTAGTGCTCCTCTATGTAGAACCATGTCGTCA10.4524886877828055No Hit
TGCTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGCACCATGTCGTCA10.4524886877828055No Hit
TGCTGATCATTGTTGATTAATGTGATACTCTATGTAGATCCATGTCGTAA10.4524886877828055No Hit
TGCTGATCAAAGATGATTCAAGTGGGGGGGGGGGGGGGGGGGGGGGGGGG10.4524886877828055No Hit
TGCTGATCAGTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCGTCA10.4524886877828055No Hit
TGCTGATCACTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCGTCA10.4524886877828055No Hit
TGCTGATCATTGTTGACTCAAGTGCTCCTCTATGTAGAACCATGTCGTCA10.4524886877828055No Hit
TGCTGAGGCGCCCCGTCCCGCGCCCCCGTCCCGCGCGGGGGGCGGGCCGG10.4524886877828055No Hit
TGCTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCTTCA10.4524886877828055No Hit
TGCTGTCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCAG10.4524886877828055No Hit
TGCTGATATTTGTTAATTAAAGTGAACAACTATGTTGACCCATGAGTCAT10.4524886877828055No Hit
TGCTGATCACTGTTGATTCAAGTGATCCTCTATGTAGAACCATGTCGTCA10.4524886877828055No Hit
TGCTGATCTTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCAG10.4524886877828055No Hit
GGTATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCCGGTCGTCAGT10.4524886877828055No Hit
TGCTGATCATTGTTGCTTCAAGTGTCCTCTATGTAGAACCATGTCGTCAG10.4524886877828055No Hit
TGGTGGGCCGCCGCGCCCGCGCGGGCCGGGTGTGTGTTTGTTTTGGGGGT10.4524886877828055No Hit
TGCTGATCATTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCGACA10.4524886877828055No Hit
TGGTGATCATTGTTGCTTCAAGTGCTCCTCTATGTAGAACCATGTCGTCA10.4524886877828055No Hit
TCTGATCATTGTTGATTCAAGTGCTCCTCTATGTAGAACCATGTCGTCAG10.4524886877828055No Hit
TGCTGATCATTGTTGCTTCAAGTGCTCCTCTATGTAGAACAATGTCGTCA10.4524886877828055No Hit
TGCTGATCATTGTCGCTTAAAGTGCTCCTCTATGTAGAACCATGAGGTCA10.4524886877828055No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)