FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008126983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008126983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93
Total Bases13.4 kbp
Sequences flagged as poor quality0
Sequence length145
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA4346.236559139784944No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA3335.483870967741936No Hit
TGCTGATCACTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA33.225806451612903No Hit
TGCTGATCATTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTAGTCA11.0752688172043012No Hit
TGCTGATTATTGTTGCTTCAAGTGCTTCACAGTGTAGAACCATGTCGCCA11.0752688172043012No Hit
TGCTGATCACTGTTGATTCAAGTGCTTCACAGAGTAGAACCATGTCGTCA11.0752688172043012No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTCACAGTGTAGAACTATGTCGTCA11.0752688172043012No Hit
TGTGATCATTGTTGCTTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG11.0752688172043012No Hit
TGTGATCATTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG11.0752688172043012No Hit
TGCTGATCATTGTTTATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA11.0752688172043012No Hit
TGCTGATCATTGTTGCTTCAGTGCTTCACAGTGTAGAACCATGTCGTCAG11.0752688172043012No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTCACAGTGTAGATCCATGTCGTCA11.0752688172043012No Hit
TGTTGATCACTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA11.0752688172043012No Hit
TGCTGTCATTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG11.0752688172043012No Hit
TGCTGATCATTGTTGATCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG11.0752688172043012No Hit
TGCTGATCATTGTTGCTTCACAGTGTAGAACCATGTCGTCAGTGTAGATC11.0752688172043012No Hit
TGCTATCACTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG11.0752688172043012No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)