FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008126985

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008126985
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84
Total Bases12.1 kbp
Sequences flagged as poor quality0
Sequence length145
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA5666.66666666666666No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA1315.476190476190476No Hit
TGCTGATCACTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA33.571428571428571No Hit
TGTTGATCAAGTGCTTCACAGTGTAGAACCATGTCGTCAGTGTAGATCTC22.380952380952381No Hit
TGCTGATCATTGTTGATACAAGTGCTTCACAGAGTAGAACCATGTCGTCA11.1904761904761905No Hit
TGCTGATCATTGTTGCTTCAGTGCTTCACAGTGTAGAACCATGTCGTCAG11.1904761904761905No Hit
TCCTGATCAAAGTTCAAACAACTCCAACACAGAGTAGAACCATCTCGACA11.1904761904761905No Hit
TGCTGATCATTGTTGATTAAGTGCTTCACAGTGTAGAACCATGTCGTCAG11.1904761904761905No Hit
TGCTGTCATTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG11.1904761904761905No Hit
TGCTAAATCACTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTC11.1904761904761905No Hit
TGCTGATCATTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCG11.1904761904761905No Hit
TGCTGATCATTGTTGATCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG11.1904761904761905No Hit
TGCTGATCATTGTTGATTCAAGTGCTCACAGTGTAGAACCATGTCGTCAG11.1904761904761905No Hit
TCTGATCATTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG11.1904761904761905No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)