FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008127150

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008127150
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51
Total Bases7.3 kbp
Sequences flagged as poor quality0
Sequence length145
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCACTTGAATCAACAATGATCAGCACCATGTAGACCAAGTCTCTGCTAC3160.78431372549019No Hit
AGCACTTGAAGCAACAATGATCAGCACCATGTAGACCAAGTCTCTGCTAC1325.49019607843137No Hit
AGCACTTGAATCAACAGTGATCAGCACCATGTAGACCAAGTCTCTGCTAC35.88235294117647No Hit
AGCACTTGAATCAACAATGATCATAACCATGTACACCAACACTCTGATAC11.9607843137254901No Hit
AGCACTTGATCAACACCATGTAGACCAAGTCTCTGCTACCGTATCATCAT11.9607843137254901No Hit
AGCACTTGAAGCAACAATGATCAGCACCATGTAGACCAAGGCTCTGCTAC11.9607843137254901No Hit
AGCACTTGAATCGACAATGATCAGCACCATGTAGACCAAGTCTCTGCTAC11.9607843137254901No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)