FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008127715

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008127715
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Total Bases1.5 kbp
Sequences flagged as poor quality0
Sequence length145
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGTGTAAGCCTCCGAACCACATGACCCACGAGTTTGTAGAACCATGTC218.181818181818183No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG218.181818181818183No Hit
TGTCACTCTCATCGGTGTCGTGGCACACCGGGAACAGCATCCCCGCGCGG19.090909090909092No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCATGACCCCCCAGGTGAGTG19.090909090909092No Hit
TGTCACTCTCATCGCTGTCGTCAGTGTAGCACTAGGAGGCCTGGAAGCGA19.090909090909092No Hit
CAAGTGTAAGCCACGGAGGCCTAGAAGAGAGTTTGTAGACACATGTAGAC19.090909090909092No Hit
TGTCACTCTCATCGCTGTCGTGGTTCTACAACCACATGACCCACGAGTTT19.090909090909092No Hit
ACCCACACCCCCCCGGCCCGCCCGGCCGGCCCCGGCCCGCCGCGGGGGGG19.090909090909092No Hit
TGTCACTCTCATCGCTGTCGTGGGTGTACGAACCCCAATAACCCCCCATT19.090909090909092No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)