FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008127810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008127810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6378
Total Bases924.7 kbp
Sequences flagged as poor quality0
Sequence length141-145
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA518081.21668234556287No Hit
TGGGTCATGTGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG711.1132016306052053No Hit
TGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG490.7682659140796488No Hit
TGGGTATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG410.6428347444339918No Hit
TGGGTCATGTGGTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG390.6114769520225777No Hit
TGGGTCTGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG390.6114769520225777No Hit
TGGGTCATGTGGTTGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG390.6114769520225777No Hit
TGGGTCATTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG330.517403574788335No Hit
TGGGTCATGGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG330.517403574788335No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGAGGTGTGTGTTGAGAA250.391972405142678No Hit
TGGGTCATGTGGTTCGGAGACGACAAATTCTCAGTGGTGTGTGTTGAGAA240.37629350893697083No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGGGAA230.3606146127312637No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCCCAGTGGTGTGTGTTGAGAA220.3449357165255566No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGAGTTGAGAA210.3292568203198495No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATCCTCAGTGGTGTGTGTTGAGAA190.29789902790843525No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCGGTGGTGTGTGTTGAGAA190.29789902790843525No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGGA180.28222013170272814No Hit
TGGGTCAGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG180.28222013170272814No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGCGTGTGTTGAGAA160.2508623392913139No Hit
TGGGTCATGTGGTCCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA160.2508623392913139No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG150.23518344308560676No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGATGAGAA150.23518344308560676No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTCGAGAA150.23518344308560676No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGCGTGTTGAGAA150.23518344308560676No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAG140.21950454687989968No Hit
TGGGCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG140.21950454687989968No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGCTGAGAA130.20382565067419253No Hit
TGGGTCATGTGGTTCGGAGGCGGCAAATTCTCAGTGGTGTGTGTTGAGAA130.20382565067419253No Hit
TGGGTCATGTGGTTCGGAGACGGCAGATTCTCAGTGGTGTGTGTTGAGAA120.18814675446848542No Hit
TGGGTCATGTGGTTCGGAGACGGTAAATTCTCAGTGGTGTGTGTTGAGAA110.1724678582627783No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTAGAGAA110.1724678582627783No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAATGGTGTGTGTTGAGAA100.15678896205707119No Hit
TGGGTCATGTGGTTCGGGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG100.15678896205707119No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGATGTGTGTTGAGAA100.15678896205707119No Hit
TGGGTCATGTGGTTCGGAGACAGCAAATTCTCAGTGGTGTGTGTTGAGAA100.15678896205707119No Hit
TGGGTCATGTGGTTCGGGGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA100.15678896205707119No Hit
TGGGTCATGTGGTTCGGAGACGGCGAATTCTCAGTGGTGTGTGTTGAGAA100.15678896205707119No Hit
TGGGTCATGTGGTTCGGAGACGGCAAACTCTCAGTGGTGTGTGTTGAGAA90.14111006585136407No Hit
CTTCCAGGCCTCCTAGTGCTGTTGTGAATATTGAATGAACACTACCTGGC70.10975227343994984No Hit
AGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA70.10975227343994984No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)