FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008127841

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008127841
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences209
Total Bases30.2 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG13162.67942583732058No Hit
AAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT62.8708133971291865No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGAAGCGAGTTTGTAGAACCAT31.4354066985645932No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTCGTCCCCCCAGGTGTGTG31.4354066985645932No Hit
CAAGTGTAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT31.4354066985645932No Hit
CAAGTGTAAGCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.9569377990430622No Hit
CAAGTGTAAGCCTCGGCCTAGGTCACGTTGGCCCTCAAAGCGAGCCGTTG20.9569377990430622No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCA20.9569377990430622No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCA20.9569377990430622No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCCGGTGTGTG20.9569377990430622No Hit
CAAGTGTTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGT20.9569377990430622No Hit
CAAGTGTAAGCCTCGGCAAACAACCCCCCCCCCCCACCCCCCCCCCGGCC10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCAAACAGGGCCTGGCTTGTCCCCCCAGGTGTGTG10.4784688995215311No Hit
CAGTGTAAGCCTCGGCGTCCTCCTCTCCCCAAGCACAGGAGCCTGGCCAG10.4784688995215311No Hit
CAAGTGTAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC10.4784688995215311No Hit
CAAGTGTAGCCTCGGCAAACAAGGGCTGACTAGTCCCCCCAGGTGTGTGA10.4784688995215311No Hit
CAAGTGTGAGCCTCGGCAAACAAGGCCTGGCTGGTCCCCCCAGGTGTGTC10.4784688995215311No Hit
TGTCACTCTCATCGCTGTCGGGAAGTCCCACGTCCTAGCCTCCTCACCTT10.4784688995215311No Hit
CAAGTGTAAGCCACGGCAACCAAGGCCTCGCTTGACCCCCCAGGTGAGTG10.4784688995215311No Hit
TGTCACTCTCATCGCTGTCGCTGAGAGCCTCACGAGTCGAGGTCCTGCAG10.4784688995215311No Hit
CAAGTGTTTGGGTGGGGTTGGGGGTGTGGTTTTGTGTGGTGTGGGGTGTG10.4784688995215311No Hit
CAAGTGTAAGCCTGGAAGCGAGTTTGTAGAACCATGTCGTCAGCACTAGG10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTTCCCCCAGGTGTGTG10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCGGGTGTGTG10.4784688995215311No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCACGCGG10.4784688995215311No Hit
CAAGTGTAAGGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGT10.4784688995215311No Hit
CAAGTTTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCAAGGTGTGTG10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGTTGGGTG10.4784688995215311No Hit
CAAGTGTAACCCTCGGCAAACAAGGCCAGGCTTGTCCCCCCAGGAGTGTG10.4784688995215311No Hit
CAAGGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.4784688995215311No Hit
CAAGTGTAAGCCTCCGAACCACATGACCCACGAGTTTGTAGAACCATGTC10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCAAACAAGACCTGGCTTGCCCCCCCAGGTGTGTG10.4784688995215311No Hit
CAAGTGTAACCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCCTCCCAAGTAGCTGGGACTACGGGCGCCCAACA10.4784688995215311No Hit
AAGTGAAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.4784688995215311No Hit
TGTCACTCTCATAGCTGTAAACCGTCCACCCTCCAAACCCAAAGAAAAGA10.4784688995215311No Hit
CAAGTGTTTGGGTGGCGTTTGTGTTTTGGATTTTGTTGGTGTCGGGCATA10.4784688995215311No Hit
TGTCACTCTCATCGCTGTCTCCGAACCACATGACCCACGAGTTTGTAGAA10.4784688995215311No Hit
TGTCACTCTCATCGCTGTGAAGATGGCGCTCTCCAGGGTGTGCTGGGCTC10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCAGGTGTGTGT10.4784688995215311No Hit
CAAGTGTAAGCCTCGGAACCACATGACCCACGAGTTTGTAGAACCATGTC10.4784688995215311No Hit
GTTGGGGTGGGGTGNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGG10.4784688995215311No Hit
CAAGTGTAAGCCTGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.4784688995215311No Hit
TGTCACTCTCATCGCTGTAAACCGTCCACCCTCCCAACCCAAAGCAAAGA10.4784688995215311No Hit
TGTCCCTCTCATCGCTGTCGGGTAGCAGAGACTAGGAGGCCAGGAAGCGA10.4784688995215311No Hit
CAAGTGTATGCGTCGGCAAACAAGGCCTGGCGTGTCCCCCCCGGTGTGTG10.4784688995215311No Hit
CAAGTGTAAGCCGCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCGGCGGCGGCCGAACCAACCGAGTCGGATCCTGA10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGAGTG10.4784688995215311No Hit
AAAGAGTAAGCCAAGGCAAACATGGACTGGCAGGTAGACCCAGGTGTGTA10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCACCCGATTTGCCAGTGCTGTCTTTTGGAGTCTG10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTCGGATTACAGGAATGAGCCA10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCCGGCTTGTCCCCCCAGGTGTGTG10.4784688995215311No Hit
CAAGTGTAAGCGTCGGCAACACCGTAAGTGAGTGGCAAAAATGTGTGTGT10.4784688995215311No Hit
CAAGTGTACGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.4784688995215311No Hit
TGTCACTCTCATCGCTGTCGTCAGTGTAGCACTAGGAGGCCTGGAAGCGA10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGCGTGTG10.4784688995215311No Hit
CATGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.4784688995215311No Hit
CAAGTGTAAGCGTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGCGTGTG10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTTCAGGCATGAGCCA10.4784688995215311No Hit
AAGTGAAAGCCTCGGCCTAGGTCACGTTGGCCCTCTAACCGAGCCGTAGA10.4784688995215311No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTTCTGGGATTACAGGCATGAGCCA10.4784688995215311No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)