FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008127873

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008127873
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences830
Total Bases120.3 kbp
Sequences flagged as poor quality0
Sequence length140-145
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG61373.855421686747No Hit
AAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT121.4457831325301205No Hit
CAAGTGTAAGCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT70.8433734939759037No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGAGTG60.7228915662650602No Hit
CAAGTGTAAGCCTCCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGT50.6024096385542169No Hit
CAATGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT40.48192771084337355No Hit
CAAGTGTAAGCCTCCGAACCACATGACCCACGAGTTTGTAGAACCATGTC40.48192771084337355No Hit
CAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT40.48192771084337355No Hit
CAAGTGTAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT40.48192771084337355No Hit
CAAGTGTTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGT40.48192771084337355No Hit
CAAGGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT30.3614457831325301No Hit
CAAGTGTTAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG30.3614457831325301No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCA30.3614457831325301No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCCGGCTTGTCCCCCCAGGTGTGTG30.3614457831325301No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCAGGTGTGTGT30.3614457831325301No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTCGTCCCCCCAGGTGTGTG30.3614457831325301No Hit
CAAGTGTAAGCCTGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT30.3614457831325301No Hit
CAAGTGTAAGCCTCGGCAAACAAGACCTGGCTTGTCCCCCCAGGTGTGTG20.24096385542168677No Hit
CAAGTGTAACCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.24096385542168677No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGCCCCCCCAGGTGTGTG20.24096385542168677No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCTCCCCAGGTGTGTG20.24096385542168677No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGCGTG20.24096385542168677No Hit
CAAGTGTAAGCCTCGGTAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG20.24096385542168677No Hit
CAAGTGTAAACCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG20.24096385542168677No Hit
CAAGTGTAAGCCTCGGCAACCAAGGCCTGGCTTGTCCCCCCAGGTGTGTG20.24096385542168677No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGTCTTGTCCCCCCAGGTGTGTG20.24096385542168677No Hit
CAAGTGAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.24096385542168677No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGTTTGTCCCCCCAGGTGTGTG20.24096385542168677No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCCTGTCCCCCCAGGTGTGTG20.24096385542168677No Hit
CAAGTGTAAGCCCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.24096385542168677No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTATCCCCCCAGGTGTGTG20.24096385542168677No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTA20.24096385542168677No Hit
CAAGTTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.24096385542168677No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGCG20.24096385542168677No Hit
CAAGTGTAAGCCTCTGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG20.24096385542168677No Hit
CTAGTGGAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCGCCAGGTGTNNN10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAGGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCACGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
GTAGTCAAAGGGTGTTTGTTTTTTTTTTTTTTTGTTTTTTTTTTGTTTAC10.12048192771084339No Hit
AAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGCCCCCCCAGGTGTGTGT10.12048192771084339No Hit
CCCGGGGGGGGGCCTAGGAAGCGGGAAGCTAGGTGCTGGTGTTTGGGGCG10.12048192771084339No Hit
CAAGTGTAAGCCTCGCCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAGGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAAGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
TGTCACTCTCATCGCTGTCGTCATCCTCCATGTCGGGGCCGCTGTCGCTG10.12048192771084339No Hit
CAAGTGTAAGCCTGGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAATGACTGGCTTGAACCCGCAGGAGAGAG10.12048192771084339No Hit
CAGTTGCATTTTCAACCCGTTCCAGGACACCCCCGCAAAGGGTGTGGTGT10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGACTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTAGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAGTGTAAGCCTCGGCAACCAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTACCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTTAAGCCTGGAAGCGAGTTTGTAGAACCATGTCGTCAGTGTAGA10.12048192771084339No Hit
TGTCACTCTCATCGCTGTCGGGTCTCTAGTTCTTGCACGCTCTTTAAGAG10.12048192771084339No Hit
CATGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCGCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCGGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAACAGAGTGAGACTCTGTCTCAAAAAATTATGT10.12048192771084339No Hit
CAAGTGTAAGCCCCGAACCACATGACCCACGAGTTTGTAGAACCATGTCG10.12048192771084339No Hit
AAGTGTAAGCCTCGGCAAACAAGGCATGGCTTGTCCCCCCAGGTGTGTGT10.12048192771084339No Hit
CAAGTGTCCGCCCCGGCACCCCAGGCCTGCCCAGGGCCTTCGTTGTGGGG10.12048192771084339No Hit
CAAGTCATACCCACCCAAATCACTGACCTAAAACCTCCTAAACCCCGTAC10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTNTG10.12048192771084339No Hit
AAAGTGTAAGCCTCAGCAAACAAGGCCGAGCTTATCGCCCCAGGCGGGAA10.12048192771084339No Hit
AAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCACCCCAGGTGTATGT10.12048192771084339No Hit
CAAGTGTAAGCCACGGCAAACAAGGCCTGGCATGTCCCCCAAGGAGTGAG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGAACCACATGACCCACGAGTTTGTAGAACCATGTC10.12048192771084339No Hit
CAATTGTAAGCCTCGGCAAACAAGGGCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.12048192771084339No Hit
CAAGAGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTN10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACTAGGCCTGGCTTATCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAACTGATTGGGACCCCAGGGCCCGGACCCTACCGCCCCTGCCGCCTGAC10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCA10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGGGTGTG10.12048192771084339No Hit
CAAGTGTACGGTAACCCTATGAACGGCACCCAACTCCCCNNNNNNNNNNN10.12048192771084339No Hit
CAAGTGTAAGCCCCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGAGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCGCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTTAAGCCTCGGCAAACAAGGTCTGGCTTGTCCCCCCAGGTGTGTGT10.12048192771084339No Hit
CAAGTGTAAGCCACGGCAAACAAGGCCTGGCTTGACCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCCTCCCGAGTAGCTGGGATTGCAGGTGCCTGCCA10.12048192771084339No Hit
TGTCACTCTCATCGCTGTCGCAGCCGCTCACTCCCCGTGTCTCTGCTTCC10.12048192771084339No Hit
CAGTGTAAGCCTCGGCAAGCAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGTCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGAGTAAGCCTCGGCAAACAAGGCCGGGCTTGTCGCCCCAGGTGGGTG10.12048192771084339No Hit
AAGTGTAAGCCTCGGCAAACAAGGCCTGGCGTGTCCCCCCAGGTGTGTGT10.12048192771084339No Hit
TGTCACTCTCATCGCTGTCGCCTTAATCCAAGCCTACGTTTTCACACTTC10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCACACAAGGCCTGGCTCGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTAGGCAAACAAACAAAATACACCGAAAAAAAAGCCCTA10.12048192771084339No Hit
CACGGGGCCGGGCCCCCCGGTCCCGGCCCCCCCCGCCCCCTGCTGGCCGC10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTCTGAT10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAGTGGTATCAACGCAGAGAAGCCCAGGGTCAAG10.12048192771084339Clontech SMARTer II A Oligonucleotide (95% over 22bp)
CAAGTCTTTGGGTGGGGTTTGTTGGCGTGGCTTGTGGGGGGGGGGGGGTG10.12048192771084339No Hit
CAAGAGTAAGCCTCGGCAAACAAGGCCTGTCTTGTCCCCCCAGGAGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGCGTGTG10.12048192771084339No Hit
CCAATCTTACACTAGTCCGAACAGAACACAAGGAAAAAGACAACGCGTAG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCACACAGCTCGGTTTCTGCCTGGAGCTGCTCCTG10.12048192771084339No Hit
CAAGCGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CTAGTGTTAGCCTCGGCAAACAAGGCCTGGCTGGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAATCCTCGGCAAACAAGGCCTGGCATCTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAAGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTTAG10.12048192771084339No Hit
GAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTACCCCCAGGAGTGTG10.12048192771084339No Hit
AAGTGTAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGTT10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCCTCCCGAAGTGCTGGGATTACAGGCGTGAGCCA10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGTTTGACCCCCCAGGTGAGTG10.12048192771084339No Hit
CAAGTGTACGCCTCGGCAAACAAGGCCTGAGATGTCCCCCCAGGAGAGTA10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACGAGGCCTGGCTCGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTGCTGGCGTGAGCCA10.12048192771084339No Hit
CAAGTGTAAGCCACGGCAAACAAGGCCAGGCTACTCCCCCCACGAGTGAG10.12048192771084339No Hit
CAAGGGGCCGGGCGCCGGGGGCCCGGCCCCCCCCGCCCCCCCCCCCCCCC10.12048192771084339No Hit
CAAGTGTAAGCCTCGGGATTGTTGGGGTGGCCTGTGGGGCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAACGCCACCCCCCACCCCCCCCCACTCCG10.12048192771084339No Hit
CAAGTGTATGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCTCCCAGGTGTGTG10.12048192771084339No Hit
TGTCACTCTCACGCTGTCGTAGCACTAGGAGGCCTGGAAGCGAGTTTGTA10.12048192771084339No Hit
CTAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
TGTCACTCTCATCCCTGTACTCCTTGACCTTGGGCTTCTCTGCGTTGATA10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAGCAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCACGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTCTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGTCCTGGCNTGTCCCCCCAGGTGTGTN10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCTCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCTGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGGATAGATGCCCACGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAGTGTAAGCCTCGGCAAACAAGGCCTGGCTCGTCCCCCCAGGTGTGTGT10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACGAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTACAGGGATTACAGGCGTGAGCCA10.12048192771084339No Hit
CAAGTGTGAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCCCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCTAGGTGTGTG10.12048192771084339No Hit
AAGTGTAAGCCTGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGTT10.12048192771084339No Hit
CAAGTGTATGCGTCGCCAAACAAGGCCTGGGTTGACCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCACCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCATCGTCAAACAAGGCCTGGCTTGTCCCCCCAGGGGTGTG10.12048192771084339No Hit
CAAGAGTAAGCCTCGTCAAACAAGGCCTGGCTAGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
TGTCCCTCTCATCGCTCCGAACCACATGACCCACGAGTTTGTAGAACCAT10.12048192771084339No Hit
CAATTTTAAGCCTCGGCAAACAAGTCCTGTCTTGTCCCCCCAGGTGAGTG10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCACGTGTGTG10.12048192771084339No Hit
CAAGTGTAAGCCAAGGAGGCCTGGAAGCGAGTTTGTAGAACCAAGTCGTC10.12048192771084339No Hit
CAGTGTAATCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.12048192771084339No Hit
CCCGCGGACGCCTCGCCCCCCCCGGCCGCGCGGGGCCCGGGGGGGCCGGG10.12048192771084339No Hit
CAAGTATAAGCCAGCCCAAACAAGGCCTGGCTTGTCCACCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGGGCGCCGGGGGGGGGGGGGGGGGGGGGGGGTAAAAAGTGGTTGT10.12048192771084339No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCATGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
CAAGTGTCAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.12048192771084339No Hit
AAGTGTGAGCCCGGCAAACAAGGCCTGGCGTGTCCCCCCAGGTGTGTGTT10.12048192771084339No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)