FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008128554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008128554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences912
Total Bases132.2 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG75682.89473684210526No Hit
CTTCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA70.7675438596491228No Hit
CTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA60.6578947368421052No Hit
CTTCCAGGCCTCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA60.6578947368421052No Hit
TTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA50.5482456140350876No Hit
CTTCCAGGCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA50.5482456140350876No Hit
CTTCCAGGCCTCCTAGTGCCCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG40.43859649122807015No Hit
CTTCCAGGCCTCCTAGTGTTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG40.43859649122807015No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGGGCTCCCAGCAGGG40.43859649122807015No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA40.43859649122807015No Hit
CCTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG30.3289473684210526No Hit
CTTCCAGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA30.3289473684210526No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCCCCTCCGAGCTCCCAGCAGGG30.3289473684210526No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAAGG30.3289473684210526No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCCCCTCCTCCGAGCTCCCAGCAGGG30.3289473684210526No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGAG30.3289473684210526No Hit
TGGGTCATGTGGTTCGGAGATGGCAAATTCTCAGTGGTGTGTGTTGAGAA20.21929824561403508No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCCCCGAGCTCCCAGCAGGG20.21929824561403508No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCTGAGCTCCCAGCAGGG20.21929824561403508No Hit
CTTCCAGGCCTCCTAAAGTGTTAAGATTACAGGTGTGAGCCACCGTGCCC20.21929824561403508No Hit
CTTCCAGGCCTCCTGATCCCCACTTCCATAGAGCTTTGCCGACACAGCCA20.21929824561403508No Hit
CTTCCAGGCCTCCTATGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA20.21929824561403508No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCTTCCTCCGAGCTCCCAGCAGGG20.21929824561403508No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCGGCAGGG20.21929824561403508No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAACTCCCAGCAGGG20.21929824561403508No Hit
CTTCCGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA20.21929824561403508No Hit
CTTCCAGGCCTCCTAGTGCTCTAGACTCCTCCTCCGAGCTCCCAGCAGGG20.21929824561403508No Hit
CTTCCAGGCCTCCTAGTGCTCTAAGCTCCTCCTCCGAGCTCCCAGCAGGG20.21929824561403508No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGTTCCTCCTCCGAGCTCCCAGCAGGG20.21929824561403508No Hit
TGGGTCGTGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA20.21929824561403508No Hit
CTTCCAGGCCTCCTAGTGCTCCAGGCTCCTCCTCCGAGCTCCCAGCAGGG20.21929824561403508No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGTG10.10964912280701754No Hit
CTTCCAGCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGAT10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCACCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTTCGAGAATGTTCGTGCCAAGTGGTACCCGGAGGTGC10.10964912280701754No Hit
CTTCCAGGCCTCCTAGAGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
TGGGTCTGTGGTTAGCATAAGCAGGGTAGGGAAAAGTAATTTTGTGCTAA10.10964912280701754No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGAGTGTGTTGAGAA10.10964912280701754No Hit
TGGGTCATGTGGTTCGGAGGTAGCGGTGCCGGCCGAGGGGGTCGGGGCGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCAAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGCGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAACAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGAAGAGTGTTAGCTGATCTGACTCTAAAATTTT10.10964912280701754No Hit
CTTCCGGCCTCCTAGTGCAAGGTGGGGGCGCAGAGACAGAGTCAATAGAG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTACTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CATCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTCCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
TGGGTATGTGGTTCGGAGGTAGCGGTGCCGGCCGAGGGGGTCGGGGCGGC10.10964912280701754No Hit
TGGGTCATGTGGTTCGGAGAAAACAACTGAGGCCAAGATGATGAAAGCTG10.10964912280701754No Hit
CTTCCAGGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTATGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGA10.10964912280701754No Hit
CTTCCAGGCCTCCAGTGCTCTAGGCTCCTCCTCCGGGCTCCCAGCAGGGA10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGTTCTAGGCTCCTCCTCCGAGCTCCCGGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTTCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCGGGGA10.10964912280701754No Hit
CTTCCAGACCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGATCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTTTGGGAGGCCGAGGCTTACACTTGTTGCCA10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGATCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTATAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGATCCAAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTGGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCGGCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGAT10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCAGCAGGGA10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCACCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
TGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG10.10964912280701754No Hit
CTTCCAGGCATCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGAGGTGTGTGTTGAGAA10.10964912280701754No Hit
CTTCCAGGCCTCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAACAGGGA10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGGTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCCCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGTGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCATTGCTTTGAATATCCTATGGCTTTTGGTGTACTGAC10.10964912280701754No Hit
TGGGTCATGTGGTTCGGAGGCTTACACTTGTTGCCAAGACCAAGTCTCTG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCGGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.10964912280701754No Hit
CTTCCAGGCCTCTAGTGTTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.10964912280701754No Hit
TGGGTATGTGGTGAATCTGTAGTTAGCATAAGCAGGGTAGGGAAAAGTAA10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCCAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCACCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCCCCAGCAGGGA10.10964912280701754No Hit
CTTCCAGGCCTCCTGGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCTTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCCCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTTACGGTTGCCGAGGCTTACACTTGTTGCCA10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCTGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTACTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCTCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGTTCCCAGCAGGG10.10964912280701754No Hit
CTTCCAGGCCTCCTAGTGCTGGGAATACAGGTGTGAGCCACTGCACCTGG10.10964912280701754No Hit
CTTCCAGGCCTCCAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.10964912280701754No Hit
TGGGTCAGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG10.10964912280701754No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)