FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008128745

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008128745
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences344
Total Bases49.7 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG18453.48837209302325No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG4713.662790697674417No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCA72.0348837209302326No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGCCCCCCCAGGTGTGTG41.1627906976744187No Hit
CAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT30.872093023255814No Hit
TGTCCCTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG30.872093023255814No Hit
CAAGTGTAAGCCTCTGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG30.872093023255814No Hit
TGTCACTCTCATCGCTGTGCTAAAACATAACTTGAACATCGTGATTAAAC20.5813953488372093No Hit
CAAGTGTAAGCCTCGGCAACCAAGGCCTGGCTTGTCCCCCCAGGTGTGTG20.5813953488372093No Hit
CAAGTGTAAGCCTCGGCAAAAAGGCAGCTGGAATCGACGAACAGGAAAAC20.5813953488372093No Hit
CAAGTGTAAGCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.5813953488372093No Hit
CAAGTGTAAGCCTGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.5813953488372093No Hit
CAAGTGTAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.5813953488372093No Hit
CAAGTGTAAGCCTCGGCAGAGGACAGGTCACGGAATGCCACCAGCCTAGT20.5813953488372093No Hit
CAAGTGTAAGCCTCGGCAAACGAGGCCTGGCTTGTCCCCCCAGGTGTGTG20.5813953488372093No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTACTATGCATGAGCC20.5813953488372093No Hit
CAAGTTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.5813953488372093No Hit
AAAGTGTAAGCCTCGGCCCAGGCTGTCCAGAGCCTCCCAGGAGCTGCTGG10.29069767441860467No Hit
CAAGTGTAAGTCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGT10.29069767441860467No Hit
CAAGTGTAAGCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAAGTGTGTGT10.29069767441860467No Hit
TGTCACTCTAATCGCTGTCGTGGCACACCGGGAACAGCTTCCCAGCGCGG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACATGGCATGGCTTGTCGCGCAAGGTGTGTG10.29069767441860467No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCTGCGCGG10.29069767441860467No Hit
TGTCACTCTCATCTCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCACAGGTGTGTG10.29069767441860467No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGTGCGG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAAAAAGGCCTGGCATGTCCCCCCAGGTGAGTG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGACATGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
TGTCACTCTCATCGCTGTCGAAGCGCACGGACTCCTCTTGGTTATAGATG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGGG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGACTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
CAAGTGTAAGCTTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
CAAGTGTAAGCCTGGCTAATTTTTGTATCTTTAGTAGAGATGGGGTTTCA10.29069767441860467No Hit
TGTCACTCTCATCGCTGTCGAAGCGCACGGACTCCTCATGGTTATAGATG10.29069767441860467No Hit
CAAGTGAAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCAC10.29069767441860467No Hit
CAAGTGTAAGCCTCGCCACACGACCCACAGTCATGTAGAACCATGTCGTC10.29069767441860467No Hit
CAAGTGTAAGCCTGGCCAAACAAGGCCTGGCTTGTCCCCGCAGGTGTGTG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGTAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
CAAGGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.29069767441860467No Hit
TGTACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC10.29069767441860467No Hit
CAAGTGTAACCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAACTTTGAGTGGTGGTTTTTTGTCGTTGT10.29069767441860467No Hit
CAAGTGTAAGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCA10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCAGGTGTGTGT10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCTCCCAGGTGTGTG10.29069767441860467No Hit
CAAGTGTGGATGATATGTGGATGCAGTCCATTACCTGGGAAAAAAGCAAA10.29069767441860467No Hit
CAAGTGTAAGCCTCGCCATCCTCCACTCCCCACGCACAGGAGCCTGGCCA10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATGACAGGCGTGAGCCA10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGTCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
TGTCACTCTCATCGCTGTCGGGGCACACCGGGAACAGCTTCCCCGCGCGG10.29069767441860467No Hit
CAAGTGTAAGCCTCGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGCTGTGTG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAGCAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCA10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCCCCCCCAAAATGCTGGGATTACAGGTGTGAGCC10.29069767441860467No Hit
CAATGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.29069767441860467No Hit
CAAGTGTAAGCCGCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
TGGCACTCTCATCGCAGTCGTGGCACACCGGGAACAGCTTCCCCGAGCGG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGGTTACAGGCATGAGCCA10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCTAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
TGTCACTCTCATCGCTGTCGTGGCCCACCGGGGACAGCTTCCCCGCGCGG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCCCCCCAAAGTGCTGGGATTACAGTCGAGAGCCA10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGTATTGTCCCCCCAGGTTTGTG10.29069767441860467No Hit
AAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.29069767441860467No Hit
TGTCACTCTCATCGCTGTCGTGGCACCCCGGGAACAGCTTCCCCGCGCGG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCAGGCTTGTCCCCCCAGGTGTGAC10.29069767441860467No Hit
CAAGTGTAAGCCTCTGCTAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCACCCAGGTGAGTG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAAAAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAATGCTGGGATTACAAGCGTGAGCCA10.29069767441860467No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCTCGCGCGG10.29069767441860467No Hit
CAAGTGTAGCCTCGGCAAACAAGACCTGGCTTGTCCCCCCAGGTGTGTGT10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCTTTCTTGTCGGCACTAGGAGGCCTGGAAGCAGT10.29069767441860467No Hit
CAAGTGTAAGCCTCCGAACCACATGACCCACAGTCATGTAGAACCATGTC10.29069767441860467No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGAAACAGCCTCCCCGCGCGG10.29069767441860467No Hit
CAAGTGTAAGCCTCTGCAAAATCCACGTTGCTGCTTCCTCTCCAGGGCTT10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTC10.29069767441860467No Hit
AGTCACTCTCAAACCTCACGATCGGCCGGGTTAGAGACGGCAGCTAGGTG10.29069767441860467No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGA10.29069767441860467No Hit
CAAGTGTAACCTCGGCAAACAAAGCCTGGCTTGTCCCCCCAGGTGTGTGT10.29069767441860467No Hit
CAGGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
CAAGTGTAAGCCTCGCAAACCTTGGCGTGGTTGGACCCCCAGGGTGGGGG10.29069767441860467No Hit
CATGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
TCTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACTAGGCCTGGCTTGCCCCCCCAGGTGTGTG10.29069767441860467No Hit
CAAGTGTAAGCCTCGGCAAACTAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
CCAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGT10.29069767441860467No Hit
CAAGCGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.29069767441860467No Hit
CAGTGTAAGCCTGGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.29069767441860467No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)