FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008128790

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008128790
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Total Bases2.4 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG1588.23529411764706No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTACTCCGAGCTCCCAGCAGGG15.88235294117647No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGTTCCTCCTCCGAGCTCCCAGCAGGG15.88235294117647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)