FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008129241

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008129241
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3210
Total Bases461.7 kbp
Sequences flagged as poor quality0
Sequence length140-145
%GC60

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG207964.76635514018692No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG3079.56386292834891No Hit
TGTCCCTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG541.6822429906542056No Hit
TGTCACTCTAATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG441.3707165109034267No Hit
TGTCACTCTCATCGCTGTCGTGGCTCCCTGAGAACAGCTCCCCTGTACAC210.6542056074766356No Hit
TGTCACTCTCATCGCTGTCGTGGCACCCCGGGAACAGCTTCCCCGCGCGG180.5607476635514018No Hit
TTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC170.5295950155763239No Hit
TGTCATCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC150.46728971962616817No Hit
TGTACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC140.43613707165109034No Hit
TGTCACTCTATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC140.43613707165109034No Hit
TGTCCTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC130.4049844236760125No Hit
TGTCACTTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC130.4049844236760125No Hit
TGTCACTCTCACGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC120.3738317757009346No Hit
TGTCACTCTCATCGCTGTCGTGGCCCACCGGGAACAGCTTCCCCGCGCGG120.3738317757009346No Hit
TGTCACTCTCATCGCTGTCGCGGCACACCGGGAACAGCTTCCCCGCGCGG100.3115264797507788No Hit
TGTCACTCTCATCGCTGTCGTGGCGCACCGGGAACAGCTTCCCCGCGCGG100.3115264797507788No Hit
TGTCACTCTCTCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC90.2803738317757009No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAACTTCCCCGCGCGG80.24922118380062305No Hit
GTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC80.24922118380062305No Hit
TGTCACTCCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC80.24922118380062305No Hit
TGTCACTCTCATCCCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG80.24922118380062305No Hit
TGTCACTGTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG70.21806853582554517No Hit
TGTCACTCTCATAGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG60.1869158878504673No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACGGCTTCCCCGCGCGG60.1869158878504673No Hit
CAAGTGTAAGCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT60.1869158878504673No Hit
TGTCACTCTCATCGCTGTCATGGCTCCCTGAGAACAGCTCCCCTGTACAC60.1869158878504673No Hit
TGTCACCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC60.1869158878504673No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGGACAGCTTCCCCGCGCGG60.1869158878504673No Hit
TGTCACTCTCATCGCTGTCGTGACACACCGGGAACAGCTTCCCCGCGCGG60.1869158878504673No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCAG60.1869158878504673No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGAACAGCTTCCCCGCGCGGC50.1557632398753894No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCGCGCGGC50.1557632398753894No Hit
TGTCACTCTCAACGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG50.1557632398753894No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAAGAGCTTCCCCGCGCGG50.1557632398753894No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCCTCCCCGCGCGG50.1557632398753894No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCAGGAACAGCTTCCCCGCGCGG50.1557632398753894No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTCCCCCGCGCGG40.12461059190031153No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGAGAACAGCTTCCCCGCGCGG40.12461059190031153No Hit
TGTCACTCTCAGCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG40.12461059190031153No Hit
CAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT40.12461059190031153No Hit
CAAGTGTAAGCCCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT40.12461059190031153No Hit
TGTCACTCTCATCGCGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC40.12461059190031153No Hit
CAAGTGTAAGCCTCTGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG40.12461059190031153No Hit
TGTCACTATCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG40.12461059190031153No Hit
TGTCACTCTCATCGCTGTCGTGGCACGCCGGGAACAGCTTCCCCGCGCGG40.12461059190031153No Hit
CAAGTGTAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT40.12461059190031153No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)