FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008129520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008129520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8193
Total Bases1.1 Mbp
Sequences flagged as poor quality0
Sequence length141-145
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA614575.00305138532894No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG5286.444525814719883No Hit
TGGGTCATGTGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG750.9154155986818016No Hit
TGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG730.8910045160502869No Hit
TGGGTCTGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG480.585865983156353No Hit
TGGGTCATTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG390.4760161113145368No Hit
TGGGTCATGTGGTTGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG350.4271939460515074No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGAGGTGTGTGTTGAGAA340.41498840473575005No Hit
TGGGTCATGTGGTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG310.378371780788478No Hit
TGGGTATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG310.378371780788478No Hit
TGGGTCATGTGGTCCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA270.3295496155254486No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGCGTGTTGAGAA270.3295496155254486No Hit
TGGGTCATGTGGTTCGGAGACGACAAATTCTCAGTGGTGTGTGTTGAGAA260.31734407420969124No Hit
TGGGTCAGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG260.31734407420969124No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGCGTGTGTTGAGAA220.2685219089466618No Hit
TGGGTCATGGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG220.2685219089466618No Hit
TGGGCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG220.2685219089466618No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGGGAA210.25631636763090443No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAG200.24411082631514708No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGCGTTGAGAA200.24411082631514708No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGATGAGAA190.23190528499938973No Hit
TGGGTCATGTGGTTGGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA180.21969974368363238No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATCCTCAGTGGTGTGTGTTGAGAA170.20749420236787502No Hit
TGGGTCATGTGGTTCGACAGCGATGAGAGTGACACTGTTCAGACCAAGTC170.20749420236787502No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCCCAGTGGTGTGTGTTGAGAA170.20749420236787502No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGAGTTGAGAA160.19528866105211767No Hit
GGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAAG160.19528866105211767No Hit
TGGGCCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA150.18308311973636032No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGCTGAGAA140.17087757842060297No Hit
TGGGTCATGTGGTTCGGAGACGGCGAATTCTCAGTGGTGTGTGTTGAGAA130.15867203710484562No Hit
TGGGTCATGTGGTTCGGAGACAGCAAATTCTCAGTGGTGTGTGTTGAGAA120.14646649578908824No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTATGTTGAGAA120.14646649578908824No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCGGTGGTGTGTGTTGAGAA120.14646649578908824No Hit
TGGGTCATGTGGTTCGGAGACGGTAAATTCTCAGTGGTGTGTGTTGAGAA120.14646649578908824No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGGA100.12205541315757354No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTCGAGAA100.12205541315757354No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGCGGTGTGTGTTGAGAA100.12205541315757354No Hit
TGGGTCATGTGGTTCGGAGGCGGCAAATTCTCAGTGGTGTGTGTTGAGAA90.10984987184181619No Hit
TGGGTCAAGTGGTTCGGAGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA90.10984987184181619No Hit
CTTCCAGGCCTCCTTGACCTTGGGCTTCTCGTCCCCCCATGTACTCTGCG90.10984987184181619No Hit
TGGGTCATGTGGTTCGGAGATGGCAAATTCTCAGTGGTGTGTGTTGAGAA90.10984987184181619No Hit
TGGGTCATGTGGTTCGGAGACGGCAAATTCTCAGTGATGTGTGTTGAGAA90.10984987184181619No Hit
TGGGTCATGTGGTTCGGGGACGGCAAATTCTCAGTGGTGTGTGTTGAGAA90.10984987184181619No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)