FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008129547

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008129547
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences212
Total Bases30.7 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG12458.490566037735846No Hit
TGTCACTCTCATCGCTGTCGAACCACATGACCCATCCAACTGTAGAACCA115.188679245283019No Hit
TGTCACTCTCATCGCTGTCCCACTACCCCATGCAATAAATCACATGGTTT73.30188679245283No Hit
CAAGTGTAAGCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT41.8867924528301887No Hit
CAAGTGTAAGCCTCGGCAAACGTGGAACAAGCCGGAGGTGATTTGAATTC31.4150943396226416No Hit
CAAGTGTAAGCCACGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG20.9433962264150944No Hit
CAAGTGTAACCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.9433962264150944No Hit
CAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.9433962264150944No Hit
CAAGTGTAAGCCTCGGCCTAGGTCACGTTGGCCCTCAAAGCGAGCCGTTG20.9433962264150944No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCA20.9433962264150944No Hit
CAAGTGTAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.9433962264150944No Hit
TGTCACTCTCATCGCTGCCGAACCACATGACCCATCCAACTGTAGAACCA20.9433962264150944No Hit
TTCACTCTCATCGCTGTCCCACTACCCCATGCAATAAATCACATGGTTTA10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAGGGCCTGGCTTGTCCCCCCAGGTGTGTG10.4716981132075472No Hit
TGTCACTCTCATCGCTGTCGAACCATAGCACTAGGAGGCCTGGAAGTCCA10.4716981132075472No Hit
CAAGTGTAAGCCTCGGAGGCCTGGAAGTCCAACTGTAGAACCATGTCGTC10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCCTGTTCCACGGCCGCTTCGAGGAAACTCCACCC10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCGGACAGCGGAGCCAGTGGTAGCCGCACGGCCCT10.4716981132075472No Hit
TAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAAAGCCTGGCTTGTCCCCCCAGGTGTGTG10.4716981132075472No Hit
TGTCACTCTCATCGCTGTCGAGCACTAGGAGGCCTGGAAGTCCAACTGTA10.4716981132075472No Hit
CAAGTGAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGTT10.4716981132075472No Hit
CAAGTGTAAGCCTTCTCCTCACTCTCTCAATCTTATCCATCATAGCAGGC10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAAGGACTGGCTTGTCCCCCCAGGTGTGTG10.4716981132075472No Hit
CAAGTGTAAGCCTCGAACCACATGACCCATCCAACTGTAGAACCATGTCG10.4716981132075472No Hit
CAAGTGTAAGCTTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.4716981132075472No Hit
CAATGTAAGCCTCGGCAAACAAGACCTGGCTTGTCCCCCCAGGTGTGTGT10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGAG10.4716981132075472No Hit
CAAGTGTAAGCCTTGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.4716981132075472No Hit
CAAGTGTAAGCCGCGGCAATCAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.4716981132075472No Hit
TGTCACTATCATCGCTGTCGAACCACATGACCCATCCAACTGTAGAACCA10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCCTCCCAGGAGCTAAGGGCTACAGGCGTGTGCCA10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCATGTGTGTG10.4716981132075472No Hit
TGTCACTCTCATCGCTGTCGATCCACATGACCCATCCAACTGTAGAACCA10.4716981132075472No Hit
CAAGTGTAAGCCTCGTCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCAGGTGTGTGT10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCGGGCTTGTCGCCCCAGGTGGGTG10.4716981132075472No Hit
CAAGTGTAAGCCTCGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.4716981132075472No Hit
CAAGTGAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGGGTGTG10.4716981132075472No Hit
CTAGTTTGAACCACGGCAAACAAGGCATGCAAGGTCCCCCAAGGTGTAAA10.4716981132075472No Hit
CAAATGTAAGCCTCGGCCTCCCAAGAGACTGGGACTAAAGGCGCCCGCCA10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACCTCCTGGTTGTCTTTGCACTCCCACCTCC10.4716981132075472No Hit
CAAGTGTAAGCCTGGCACGGTGACTCACGCCTGTAATCCCAGCACTTTGG10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCCTGTCCCCCCAGGTGTGTG10.4716981132075472No Hit
TGTCACTCTCATCGCTGTCTCCGAACCACATGACCCATCCAACTGTAGAA10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACACGGCCTGGCTTGTCCCCCCAGGTGTGTG10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGACCACAGACAGGAGCCA10.4716981132075472No Hit
CAGTGTTTGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCACGAGACACA10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTATCCCCCCAGGTGTGTG10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAAATGGCCCCGTAACTTTGGAAGAAGGGGTGC10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCCGGCGCGCACCTTCGTGTGGTACCGAACCGTGG10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTCTC10.4716981132075472No Hit
TGTCACTCTCATCGCTGTCGTTATGGCTTCAAAAACTGTAAGAAAGCATC10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCCGGGATTACACACGTGAGCCA10.4716981132075472No Hit
TGTCACTCTCATCGCTGTCGTAAGCACTAGGAGGCCTGGAAGTCCAACTG10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAATCTTACCCCGCCTGTTTACCAAAAACATCA10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAACTGGTTTGGAAAAGGAAGGAGAGGTTTGATT10.4716981132075472No Hit
CAAGTGTAAGCCTAGGCAAACGTGGAACAAGCCGGAGGTGATTTGAATTC10.4716981132075472No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGCCCCCCCAGGTGTGTG10.4716981132075472No Hit
CAAGTGTAAGCCTCGCTAACCTCGCCTTACCCCCCACTATTAACCTACTG10.4716981132075472No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)