FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008129579

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008129579
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Total Bases3.7 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCACTCTCATCGCTGTCGAACCACATGACCCATCCAACTGTAGAACCA623.076923076923077No Hit
CAAGTGTAAGCACTAGGAGGCCTGGAAGTCCAACTGTAGAACCATGTCGT27.6923076923076925No Hit
TGTCACTCTCATCGCTGTGTACCTTTGTCTCTTTAAATATTCTGAAATCC27.6923076923076925No Hit
CAAGTGTAAGCCTCCGAACCACATGACCCATCCAACTGTAGAACCATGTC13.8461538461538463No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCCGGGATTACAGGCGCGAGCCA13.8461538461538463No Hit
TGTCACTCTCATCGCTGTCGAACCAATGACCCATCCAACTGTAGAACCAT13.8461538461538463No Hit
CAAGTGTAAGCCTAGGAGGCCTGGAAGTCCAACTGTAGAACCATGTCGTC13.8461538461538463No Hit
CAAGTGTAAGCCTCGGCCAGGATCAGCTCCACCAGGCTGATGAGCGCCGG13.8461538461538463No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTTCTGCGGTCATAGGCATGAGCCA13.8461538461538463No Hit
CAAGTGTAAGCCTCGGCCAGGATCAGCTCCACCAGGCTGATGAGCTCCGG13.8461538461538463No Hit
TGTCACTCTCATCGCTGCCGAACCACATGACCCATCCAACTGTAGAACCA13.8461538461538463No Hit
TGTCACTCTCATCACATGACCCATCCAACTGTAGAACCATGTCGTCAGTG13.8461538461538463No Hit
TGTCACTCTCATCGCTGTCCCGAACCACATGACCCATCCAACTGTAGAAC13.8461538461538463No Hit
CAAGTGTAAGCCTCGGCCTACCAAAGCAATGGGATGACATGTGTGAGCCA13.8461538461538463No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTACACCA13.8461538461538463No Hit
TGTCACTCTCATCGCTGNCGAAGCACATGACCCATCCAACTGTAGATCCA13.8461538461538463No Hit
CAAGTGTAAGCTCGGCCTCCCAAAGTGCTGAGACTACAGGCGTGAGCCAC13.8461538461538463No Hit
TGTCACTCTCATCGCTGTCGATCCACATGACCCAAGCAACTGTAGAACCA13.8461538461538463No Hit
CAAGTGTAAGCCTCGGCATCCCGAAGTGCTGGGATTACAGGCGTGAGCCA13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)