FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008129634

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008129634
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Total Bases1.7 kbp
Sequences flagged as poor quality0
Sequence length145
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGTCATGTGGTTCGACAGCGATGAGAGTGACACTGTTCAGACCAAGTC541.66666666666667No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG216.666666666666664No Hit
TGGGTCATGTGGTTCGGCAGCGATGAGAGTGACACTGTTCAGACCAAGTC216.666666666666664No Hit
TGGGTCATGTGGTCCGACAGCGATGAGAGTGACACTGTTCAGACCAAGTC18.333333333333332No Hit
TGGGTCATGTGGTTAGGCAGCGATGAGAGTGACACTGTTCAGACAAAGTC18.333333333333332No Hit
CTTCCAGGCCTCCTAGTGCTGACTTGGTCTCGTCTTTGCCGAGGCTTACA18.333333333333332No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)