FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008129910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008129910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1423
Total Bases206.2 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG117082.22066057624737No Hit
CTTCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA120.8432888264230498No Hit
TTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA110.7730147575544624No Hit
CTTCCAGGCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA90.6324666198172875No Hit
CTTCCAGGCCTCCTAGTGTTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG70.4919184820801124No Hit
CATCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG50.35137034434293746No Hit
TGGGTCAGATACAGTGAAAGATATGATCCTGAGCCCAAATCAAAATGGGA50.35137034434293746No Hit
CTTCCAGGCCTCCTAGTACTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG40.28109627547434995No Hit
CTTCCAGGCCTCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA40.28109627547434995No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCCCCGAGCTCCCAGCAGGG40.28109627547434995No Hit
TTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG40.28109627547434995No Hit
CTTCCAGGCCTCCTAGTGCTCCAGGCTCCTCCTCCGAGCTCCCAGCAGGG40.28109627547434995No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCGGCAGGG30.21082220660576245No Hit
CTTCCAGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA30.21082220660576245No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCAAGCTCCCAGCAGGG30.21082220660576245No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCCCCTCCGAGCTCCCAGCAGGG30.21082220660576245No Hit
CTTCCTGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG30.21082220660576245No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCACCTCCGAGCTCCCAGCAGGG30.21082220660576245No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCTGGG30.21082220660576245No Hit
CTTCCAGGCCTCCTAGTGCCCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG20.14054813773717498No Hit
TGGGTCATGTGGTGAATATGAGTAGATTTTTTGGGAAAAATGTCTTCAAG20.14054813773717498No Hit
CTTCCAGGCCTCCTAGTGCTGGGTGGGACCGCGGTGACTGAACCTAGAAG20.14054813773717498No Hit
CTTTCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG20.14054813773717498No Hit
TGGGTCATGTGGTTCGGCAGCGATGAGAGTGACACTGTTCAGACCAAGTC20.14054813773717498No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTTCCAGCAGGG20.14054813773717498No Hit
TGGGTCATGTGGTTCGGAGCAGAAATACTAAAGAAGATTCCGGGCCGAGT20.14054813773717498No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCATCCTCCGAGCTCCCAGCAGGG20.14054813773717498No Hit
CTTCCGGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG20.14054813773717498No Hit
CTTCCAGGCCTCCTGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA20.14054813773717498No Hit
CTTCCAGGCCTCCCAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG20.14054813773717498No Hit
TGGGTCATGTGTTCGTGAAGAGCGAAAGAAAGCAAAGAAGAACAAAGACA20.14054813773717498No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGTAGGG20.14054813773717498No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGGGCTCCCAGCAGGG20.14054813773717498No Hit
CTTCCAGGCCTTCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAAGG20.14054813773717498No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCCCCTCCTCCGAGCTCCCAGCAGGG20.14054813773717498No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCAGCAGGGA20.14054813773717498No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGAG20.14054813773717498No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCCCCCAGCAGGG20.14054813773717498No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCAGAGCTCCCAGCAGGG20.14054813773717498No Hit
CTTCCAGGCCTCCTAGTGCTGGGATTACAGGTGTGAGCCACTGTGCCTGG20.14054813773717498No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)