FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008130017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008130017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Total Bases1.7 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGTGTAAGCCTGTAGGTGTAGGCGCAGCGAAAGCGAGTCTTAAATGGG18.333333333333332No Hit
TGTCACTCTCATCGCTGTCGAACCACATGACCCATCCAACTGTAGAACCA18.333333333333332No Hit
CAAGTGTAAGCCGATAGGTGCAGGCGCAGCGAAAGCGAGGCTGAACAGGG18.333333333333332No Hit
CAAGTGTAAGCCGGTAGGTGTAGGCGCAGCGAAAGCGAGTCTTAAATGGG18.333333333333332No Hit
TGTCACTCTCATCCCTGTCGAACCACATGACCCATCCAACTGTAGAACCA18.333333333333332No Hit
CAAGTGTAAGCCTCGGAGGCCTGGAAGTCCAACTGTAGAACCATGTCGTC18.333333333333332No Hit
CAGTGTAAGCCGGTAGGTGGAGGCGTAACGAAAGCGAGTCTGAACAGGGC18.333333333333332No Hit
CAAGTGTAAGCCGATAGGTGAAGGCGCAGCGAAAGCGAGTCTGAACAGGG18.333333333333332No Hit
TGTCACTCTCATCGCTGTCGGGCACGATGGCGATCTCCGAGACCACGCTG18.333333333333332No Hit
TGTCACTCTCATCGCTGTCGAACCACATGGCCCATCCAACTGTAGAACCA18.333333333333332No Hit
TGCGTTCAGTTCGTGGCTTTAGACCCGAAACCGAGTGATCTAGCCATGTG18.333333333333332No Hit
CAAGTGTAAGCCTCGGAACCACATGACCCATCCAACTGTAGAACCATGTC18.333333333333332No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)