FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008130170

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008130170
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences627
Total Bases90.8 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC59

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAA34755.34290271132376No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTC8012.759170653907494No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC132.073365231259968No Hit
AGATCATGTACGTCGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTCT111.7543859649122806No Hit
CATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAAG91.4354066985645932No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCTCACAGAGACCAA71.1164274322169059No Hit
CCATTAGTGAGCTGGCAAACCCTGTGATGATTGATGCTCACAGAGACCAA71.1164274322169059No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCTCACAGAGACCAA60.9569377990430622No Hit
CCATTAGTGAGCTGGCCAACCCTTGATGATTGATGCTCACAGAGACCAAG60.9569377990430622No Hit
CCATTAGTGAGCTGGCCAACCCTGTATGATTGATGCTCACAGAGACCAAG40.6379585326953748No Hit
CCATTAGTGAGCTGGCCAACCCCGAGAACCAGTTCAGAGTGGACTACATT40.6379585326953748No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAAGATTGATGCTCACAGAGACCAA40.6379585326953748No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATGATGCTCACAGAGACCAAG30.4784688995215311No Hit
CCATTAGTGAGCTGGCAACCCTGTGATGATTGATGCTCACAGAGACCAAG30.4784688995215311No Hit
CCATTAGTGAGCTGGCCAGTGCCCTCGTAGAGGCCCTTGCGAGCAGGGTT30.4784688995215311No Hit
AGATCATGTACGTCGGAGGATAAAGGCAACGTTCACAGAGACCAAGTCTC30.4784688995215311No Hit
AGATCATGTACGTCGGGGATAAAGGCAACGTTCACAGAGACCAAGTCTCT30.4784688995215311No Hit
CCATTAGTAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAAG30.4784688995215311No Hit
AGATCATGTACGTCTGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTC20.3189792663476874No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGTCACAGAGACCAAG20.3189792663476874No Hit
CATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCA20.3189792663476874No Hit
CCTTAGTGAGCTGGCCAACCCTGTGATGATAGATGCTCACAGAGACCAAG20.3189792663476874No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATACTCACAGAGACCAA20.3189792663476874No Hit
CCATTAGTGACTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAAG20.3189792663476874No Hit
CCATTAGTGAGCTGGCCAAACAGGTCTGGCTGAAGAGGAGGTTGGAAGTG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCTACCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACATGGCGAAATGCCACCTCTACAGAAAATAC10.1594896331738437No Hit
CCATTGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAGCCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
AGATCATGTACGTCGGGGACGCGCTGCTGCAGCGGGAGGATAAAGGCAAC10.1594896331738437No Hit
CATTAGTGAGCTGGCAACCCAGTGATGATTGATGCTCACAGAGACCAAGT10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGACGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CAATTAGTGAGCTGGCCAACCCTGTATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
AGATCATGTACGTCGGGGACACAGTGGGGCCGGTTGGCCTGGTCCACGAT10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGTTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGTGGCTGGCCAACCCTGTGATGATTATGCTCACAGAGACCAAGT10.1594896331738437No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGATCACAGAGACCAAGTC10.1594896331738437No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTCACAGAGACCAAGTCT10.1594896331738437No Hit
CCATTAGTGAGCTGGCAAACCCTGTAATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTATGAATGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAAACAGGTCTGGCTGAAGAGAAGGTTGGAAGTG10.1594896331738437No Hit
AGATCATGTACGTCGGGGACGATAAAGGCAACGTTCACAGAGACCAAGTC10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGTTCACAGAGACCAA10.1594896331738437No Hit
AGATCATGTACGTCGGGGACATGGCTGATGGTCTTAATTTCATGCCCTTG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACAGTGAGGAAGTGACACAGAGCTCAAGGAAG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCGGATGATTGATGCTCACAGAGACCAAGT10.1594896331738437No Hit
CCATAGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGTGAGCCGGCCACCCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGAAAGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCAAGGTTGCTGGCTAGACCTCGAGAAATC10.1594896331738437No Hit
AGATCATGTACGTCGGGGAGGATAAGGCAACGTTCACAGAGACCAAGTCT10.1594896331738437No Hit
CCAATAGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCACCCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCTCACAGAGCCCAA10.1594896331738437No Hit
AGATCATGCACGTCGGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTC10.1594896331738437No Hit
AGATCATGTACGTGGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTCT10.1594896331738437No Hit
CCATTATGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCGGGCTATACCTCGAGAAATC10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAGGATTGATGCACTCAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGTTAGTGAAGATCACACAGGCAATG10.1594896331738437No Hit
CCTTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAAGCAAGTAGCCTCCGAGATGCGCTTCGTGCAG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTTATGATTGATGCTCACAGAGACCAAGT10.1594896331738437No Hit
CCATTAGTGAGCCGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
AGATATGTACGTCGGGGGGATAAAGGCTACGTTCACAGAGACCAAGTCTC10.1594896331738437No Hit
CCATTAGTGAGCTGTCCAACCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCGGGCTGATTGATGCTAACAGAGGCCAAG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACTCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAACTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCGACCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCAGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAAACCCGAGAACCAGTTCAGAGTGGGCTACATT10.1594896331738437No Hit
CCATTAGTGAGCTGGCAACCCTGTGTGATTGATGCTCACAGAGACCAAGT10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGGATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCTTTAGTGAGCTGGCCAACCCGTGATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
AGATCATGTACGTCGGGGAAGATAAAGGCAACGTTCACAGAGACCAAGTC10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAAGATTGAGCTCACAGAGACCAAG10.1594896331738437No Hit
CCTTTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
AGATCATTACGTGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTCTCT10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATCGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACAAA10.1594896331738437No Hit
CCTTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGTGAGCTGCCCATCCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGGCAACCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATCTCACAGAGACCAAG10.1594896331738437No Hit
AGATCATGTAGTCGGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTCT10.1594896331738437No Hit
CCATTAGTAAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGAGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCGTGATGATTGATCTCACAGAGACCAAGT10.1594896331738437No Hit
CCATTAGTAGCTGGCCAAACAGGTCTGGCTGAAGAGAAGGTTGGAAGTGG10.1594896331738437No Hit
CCATTGTGAGCTGGCCAAACCCGAGAACCAGTTCAGAGTGGACTACATTC10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTAATGCTCACAGAGACCAA10.1594896331738437No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTTCACAGAGACAAAGTC10.1594896331738437No Hit
CGTTAGTGACAAGAGGGACATCTCGTGATTTCTCGAGTCCAACCCTGTGA10.1594896331738437No Hit
AGATCATGTACGTCGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTAT10.1594896331738437No Hit
CCATTAGTGGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACATGGCGAAACCCCATCTCTATAAAAAGTAC10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCTGTGATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGTGAGCGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
AGATCATGTACGTCGAGGATAAAGGCAACGTTCACAGAGACCAAGTCTCT10.1594896331738437No Hit
AGATCTGTACGTCGGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTCT10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAAACCCCGTCTCTACAAAAATTACCCGGGTGTG10.1594896331738437No Hit
CCTTAGTGAGCTGGCCACCCTGTGATGATTGATGCTCACAGAGACCAAGT10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTATGATTATGCTCACAGAGACCAAGT10.1594896331738437No Hit
AGATCATGTACGTCGGGGGGATAAAGGCAACGTCACAGAGACCAAGTCTC10.1594896331738437No Hit
CATTAGTGAGCTGGCCAACCCTGTGATATTGATGCTCACAGAGACCAAGT10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAAACGTGCCTCGACCAAGAAAATCAAGGACTTC10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAAGCCACCACCGCCTACTTCCTGTACCAGCAGC10.1594896331738437No Hit
AGATCATGTACGTCGGGGGGATAAAGGCAACGTTCACAGAGACCAAGTCT10.1594896331738437No Hit
CCATTAGTGAGTTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCCGAGATCCAGTTCAGAGTGGACTACATT10.1594896331738437No Hit
CATTAGTGAGCTGGCCAACCCTGTGATGATGATGCTCACAGAGACCAAGT10.1594896331738437No Hit
CCATTATGAGCTGGCCCACCCTGTGATGATTGATGCTCACAGAGACCAAG10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGTGCTCACAGAGACCAAG10.1594896331738437No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTTCACAGAGAACAAGTC10.1594896331738437No Hit
AGATCATGTACTCGGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTCT10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGAGCAA10.1594896331738437No Hit
CCATTAGTGAGCTGGCCAACCCTGCGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAACTGGCCAACCCTGCGATGATTGATGCTCACAGAGACCAA10.1594896331738437No Hit
CCATTAGTGAGCAGTCCAACCCTCAGATGAATCAACCACACAGAGCCCAA10.1594896331738437No Hit
CATTAGTGAGCTGGCCAACCCTTGATGATTGATGATCACAGAGACCAAGT10.1594896331738437No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)