FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008130299

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008130299
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4
Total Bases577 bp
Sequences flagged as poor quality0
Sequence length142-145
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGTTGCTTTATCCTCCCCGATCCAGGAGTGGGGCCCATTCGATCTGGTG125.0No Hit
CGTTGCCTTTATCCTCCCAGATCCAGGAGTGGGGCCCATTCGATCTGGTG125.0No Hit
GAATCAATAATCACAGGGTTTGACTAGAGAAATCGCTAGATTTACCTCTT125.0No Hit
ACGTTGCCTTGCGCCGCCCCCCGCGCAGGGGCCGTCGAAGAGACGGCTGG125.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)