FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008130401

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008130401
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467
Total Bases67.6 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC61

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA22347.75160599571734No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATCTCCATGTTGTAGAACCA6614.132762312633835No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGCCATGTTGTAGAAC102.141327623126338No Hit
GCATCAATCATCAAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC81.7130620985010707No Hit
ACGTTGCCTTTATCCTCCCGACGTACATGATCTCCATGTTGTAGAACCAT71.4989293361884368No Hit
ACGTTGCCTTTATCCTCCCAGATCCAGGAGTGGGGCCCATTCGATCTGGT61.284796573875803No Hit
ACGTTGCCTTTATCCTCCGACGTACATGATCTCCATGTTGTAGAACCATG40.8565310492505354No Hit
GCATCAATCATCACAGGGTTTGCCAGCTCACTAATGGCCATGTTGTAGAA40.8565310492505354No Hit
GCATCAATCATCACAGGTTTGGCCAGCTCACTAATGGCCATGTTGTAGAA30.6423982869379015No Hit
ACGTTGCCTTTATCCCCCCGACGTACATGATCTCCATGTTGTAGAACCAT30.6423982869379015No Hit
GCATCAATCATCACAGGGTTGCCAGCTCACTAATGGCCATGTTGTAGAAC30.6423982869379015No Hit
GCATCAATCATCACAGGGTGGCCAGCTCACTAATGGCCATGTTGTAGAAC20.4282655246252677No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTAGTAGAA20.4282655246252677No Hit
GCATCAATCATCACAGGGTTGGTAAGGTTCTGCGCGTTGCTTCGAATTAA20.4282655246252677No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAC20.4282655246252677No Hit
GCATCATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC20.4282655246252677No Hit
GCATCAATCATCTCAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA20.4282655246252677No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCATAATGGCCATGTTGTAGAAC20.4282655246252677No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCCTGTTGTAGAA20.4282655246252677No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTGGGAGAA20.4282655246252677No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACGAATGGCCATGTTGTAGAA20.4282655246252677No Hit
GCATCAATCATCACAGGGTTGGACTCGAGAAATCGCGAGATGTCCCTCTT20.4282655246252677No Hit
GCATCAATCACACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC20.4282655246252677No Hit
GCATCAATATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC20.4282655246252677No Hit
GCATGTTACATCACAGGGTTGGCCAGCTCACTAATGGCGTAGTAGTTGTT10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCGCACTAATGGCCATGTTGGCGAA10.21413276231263384No Hit
AGGTTGGTTTTATCCTCCCCGACGTACTTGATAACCAAGTTGTAGAACCT10.21413276231263384No Hit
AGATGCATTTAGCCTCCCCTAAGTACATGATCTCCATGTTGTAGAACCGG10.21413276231263384No Hit
ACGTAGGCTTTATCCACCCCGACGTACTTGATCTCCATGTTGTAGAACCT10.21413276231263384No Hit
GCATCAATCATCACAGGGGTGGCCGGCTCACAAATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAAGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAT10.21413276231263384No Hit
GCTTCACTCTTCACAGGGTGGGCCAGCTGACTAATGGCCATGTTGTAGGG10.21413276231263384No Hit
GCATCAATATCAAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAACC10.21413276231263384No Hit
GCATCAATCATAACCGGGTAGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
ACGTTGCCTTTATCCTCCCGACGTACATGATCTCCATGGGGTAGAACCAT10.21413276231263384No Hit
GCATAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAAAGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGATCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATAAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAACC10.21413276231263384No Hit
ACGTTGCCTTTAGCCACNCGGACGTACATGATCTCCATGTTGTAGATCCA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTGATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATCACAGGTTTGGCCAGCTCACTAATGCCATGTTGTAGAAC10.21413276231263384No Hit
GCATCAATCATCAAAGGGTTGGCCAGCTCACTAATGGACATGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGTC10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGACTCGAGAAATCACGAGATGTCCCTCTT10.21413276231263384No Hit
GCATCAATCATCACGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCATCAATCATCACAGAGTTGGCCAGCTCACTGATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATCGATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTATGGCCATGTTGTAGCAC10.21413276231263384No Hit
GCATCAATCATCAGTGGGTTGGCCAGCTCACTAATGGCCTTGTTGTAGAA10.21413276231263384No Hit
GCATCAATATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAAAAC10.21413276231263384No Hit
GCATCAATCAGCACAGGGTTGGCCAGCACACTAAAGGCCATGTTGTAGAA10.21413276231263384No Hit
GTTGCCTTTATCCTCCCGACGTACATGATCTCCATGTTGTAGAACCATGT10.21413276231263384No Hit
GCATAAATCATTACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATCACAGGGGTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATCACCGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGTCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
GATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
ACGTTGCCCTTATCCTCCCCGACGTACATGATCTCCATGTTGTAGAACCA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCGCACTAATGGCCATGTTGGAGAA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGCCAGCCCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAAGGCCATGTGGAAGAAC10.21413276231263384No Hit
CGTTGCCTTTATCCTCCCATGGTCCCCGACGTACATGATCTCCATGTTGT10.21413276231263384No Hit
GCATCAATAATCACAGGGTTGGTCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATCTCCATGTTGTGGAACCA10.21413276231263384No Hit
GCATCAATCATCACAGCGATGTCAATCTCACTAATGGCCAAGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATCACAGGGATGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
ACGTTGCCTTTATCCCCCGACGTACATGATCTCCATGTTGTAGAACCATG10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTGTGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCCGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
ACGTTGCCTTTATCCTCGACGTACATGATCTCCATGTTGTAGAACCATGT10.21413276231263384No Hit
GCATCAATCATCACAAGGTTGGCCAGCTCACTAATGGCCATGTTATAAAA10.21413276231263384No Hit
GCTCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
ACGTTGCCTTTATCCTCCCACGTACATGATCTCCATGTTGTAGAACCATG10.21413276231263384No Hit
GCATCATCATCACAGGGTTGGCCAGCTCACTAATGCCATGTTGTAGAACC10.21413276231263384No Hit
ACGTTGCCTATATCCTCCCCGACGTACATGATCTCCATGTTGTAGAACCA10.21413276231263384No Hit
GCATCAATCATCAAGGGTTGGCCAGCTCACTAATGCCATGTTGTAGAACC10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCAGCTCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCATCAATCATCACAGGTGGCCAGCTCACTAATGGCCATGTTGTAGAACC10.21413276231263384No Hit
GCATCTATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
ACGTTGCCTTTATCCTCCCCGATGTACATGATCTCCATGTTGTAGAACCA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGCCAGCTCACTATGGCCATGTTGTAGAACC10.21413276231263384No Hit
AGGTTGGCTTTATCCTCCCCGACGTACTTGAACACCATGATGTAGAACCT10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCACTCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCAGCAATCATCAATGCCATGGGGTGGTGACTAATGGGGATGTTGTAGAA10.21413276231263384No Hit
GCATCAACATAACAAGGTTGGTCAGCTAACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCATCATCATCACAGGGTCGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCATCAATCATCCCAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
ACGTTGCCTTTATCCTCCCAGACGTACATGATCTCCATGTTGTAGAACCA10.21413276231263384No Hit
GCATCAATATCACGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAACC10.21413276231263384No Hit
GCATCAATCCTCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
ACGGTGCCTTTATCCAGGGGGTCCTTGAAGATCTCGTTGTTGTAGAACCA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAGGGGGGGGGGGGGGGGG10.21413276231263384No Hit
ACGATGCCTTTATCCTCCCCCCCGACGAACATGATCTCCATGTTGTAGAA10.21413276231263384No Hit
ACGTTGCCTTTATCCTCCCATTGGTCCCCGACGTACATGATCTCCATGTT10.21413276231263384No Hit
GCATCAATCATCACAGCGTTGGCCAGCACACAAATGGCCATGATGAAGAA10.21413276231263384No Hit
ACGTTGCCTTTATCCTCCCCCACGTACATGATCTCCATGTTGTAGAACCA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTATGCCATGTTGTAGAACC10.21413276231263384No Hit
ACGTTGCCTTTATCCTCCCCACGTACATGATCTCCATGTTGTAGAACCAT10.21413276231263384No Hit
GGAAGATNCATCACAGGGTTGGCCAGCTCACTNATGGCCATGTTGTAGAT10.21413276231263384No Hit
GCATCAATCATCATAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
ACGCTGCCTTTATCCTCCCGACGTACATGATCTCCATGTTGTAGAACCAT10.21413276231263384No Hit
GCATCAAACATAACAGGGTTGGCCAGCTCAATAATGGCCATGTTTTAGAA10.21413276231263384No Hit
ACGTTGCCTTTAGCCTCCCCGACGTACATGATCTCCATGTTGTAGAACCA10.21413276231263384No Hit
GCATCAATCATCAAAGGGTTGGCCAGCTCACTAATGGCCATGATGTAGAA10.21413276231263384No Hit
ACGTTGCCTTTATCCGCCCCGACGTACATGATCTCCATGTTGTATAACCA10.21413276231263384No Hit
GCATCAACATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCATCAATCAACACAGGGTTGGCCAGCCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATCTCCATGTTGTCGCACCA10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCCCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCTCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTAGTAGAAC10.21413276231263384No Hit
GCATCAATCATCAAGGGTTGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNN10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGTCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
GCGTCAATCATCACAGGGTTGGCCGGCTCACTAATGGCCATGTTGGAGAA10.21413276231263384No Hit
GCATCAATCATCACAGAGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATCAATCATCAAGGGTTGGCCAGCTACTAATGGCCATGTTGTAGAACC10.21413276231263384No Hit
GCATGATGCATAACAGGGTTGGCCAGCTCACTCTTGGCCATGTTGTAGAT10.21413276231263384No Hit
GCATCAATCTCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.21413276231263384No Hit
ACGTTGCCTTTATCGTCCCCGACGTACATGATCTCCATGTTGTAGAACCA10.21413276231263384No Hit
GCATCAATCTCACAGGGTTGGCCAGCTCACTAATGCCATGTTGTAGAACC10.21413276231263384No Hit
GCATCAATCATCACAGGGTTGGCCAGCCACTAAAGGCCATGTTGTAGAAC10.21413276231263384No Hit
ACGTTGCCTTTATCCCCCGACGTACATGATCTCGAAGTTGTAGAACCATG10.21413276231263384No Hit
AGTTGCCTTTATCCTCCCCGACGTACATGATCTCCATGTTGTAGAACCAT10.21413276231263384No Hit
GCATCAATCATAACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit
GCATTAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.21413276231263384No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)