FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008130403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008130403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences348
Total Bases50.4 kbp
Sequences flagged as poor quality0
Sequence length145
%GC61

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA18452.87356321839081No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATCTCCATGTTGTAGAACCA3911.206896551724139No Hit
ACGTTGCCTTTATCCTCCCGACGTACATGATCTCCATGTTGTAGAACCAT92.586206896551724No Hit
GCATCAATCATCACAGGGTTTGCCAGCTCACTAATGGCCATGTTGTAGAA51.4367816091954022No Hit
GCATCAATCATCACAGGGTTGCCAGCTCACTAATGGCCATGTTGTAGAAC51.4367816091954022No Hit
GCATAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC30.8620689655172413No Hit
GCATCAATCATCCAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC30.8620689655172413No Hit
GCATCAATCATCAAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC30.8620689655172413No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGCCATGTTGTAGAAC20.5747126436781609No Hit
GCATCAATCATCACGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC20.5747126436781609No Hit
GCATCAATCATCACAGGGCCAGCTCACTAATGGCCATGTTGTAGAACCAT20.5747126436781609No Hit
ACGTTGCCTTTATCCTCCCACGTACATGATCTCCATGTTGTAGAACCATG20.5747126436781609No Hit
ACGTTGCCTTTATCCCCCCGACGTACATGATCTCCATGTTGTAGAACCAT20.5747126436781609No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCCTGTTGTAGAA20.5747126436781609No Hit
ACGTTGCCTTTATCCTCCCCCGACGTACATGATCTCCATGTTGTAGAACC20.5747126436781609No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCAGGTTGTAGAA10.28735632183908044No Hit
AGGTTGCCTTTCTCCTCCCAGACGTACATGATCTCAATGTTGTAGAACCC10.28735632183908044No Hit
GCATCAATCATCACAGGGTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
ACGTTGCCGTTATCCTCCCAGATCCAGGAGTGGGGCCCATTCGATCTGGT10.28735632183908044No Hit
GCATCAATATACAGGGAAGGCCAGCTCACTAATGGCCATGTTGTAGAACC10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCAGCCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCACTCACTAATGCCATGTTGTAGAAGC10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCGACGTACATGATCTCCATGTTGTAGAACCATG10.28735632183908044No Hit
GCAGCAAGCATCACAGGGTTGGCCAGCGCACTAAATGCCATGGTGTAGAA10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTAGTAGAA10.28735632183908044No Hit
GCATCAATCATCACAGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAAAGGCCATGTTGTAGAA10.28735632183908044No Hit
GCATCAATCATCACGGGTTGGCCAGCTCACTAATGCCATGTTGTAGAACC10.28735632183908044No Hit
GCATCAATCATCACAGGTTTGGCCAGCTCACTAATGCCATGTTGTAGAAC10.28735632183908044No Hit
ACGTAGCCTTTATCCTCCCCGACGTACATGATCTCCATGTTGTAGAACCA10.28735632183908044No Hit
GAATCAATAATCACAGGGTTGGCCAGCCACAAAAGGCCATGTTGTAGAAC10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATCTCCATGTTGTAGAACAT10.28735632183908044No Hit
GCATCAATCATCAGTGGGTTGGCCAGCTCACTAATGGCCTTGTTGTAGAA10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCCCGACCTACATGATCTCCATGGTGTAGAACCA10.28735632183908044No Hit
ACGGTGCCTTTATCCTCCCCGACGTACAGGGGGGGGGGGGGGGGGGGGGG10.28735632183908044No Hit
GCATCAATCATCACCGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
GCATATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAACC10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCCCGACGTACAAGATCTCCATGTTGTAGAACCA10.28735632183908044No Hit
ACGTTGCCTTTATCATCCCCGACGTACCTGATCTCCATGTTGTAGCACCA10.28735632183908044No Hit
GCATCAATCATCATGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCCTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
ACGTTCCCTTTATCCTCCCCGACGTACATGATCTCCATGATGTAGAACCA10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATCTCCATGTTGCAGAACCA10.28735632183908044No Hit
ACGTTGCATTTATCCTCCCCGATGTACATGATCTCAATGTTGTAGAACCA10.28735632183908044No Hit
GCATCAATCATCACCGGGTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
GCATCAATCATACCTTGGTTGGCCAGCTCACTAATGGCCAAGTTGTAGAA10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATCTCCATGTTGTGGAACCA10.28735632183908044No Hit
GCATCAATCGTCACAGGGTTGGCCAGCTCACTAAGGCCATGTTGTAGAAC10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGACCAGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
GCATCAATCATCACAGGGATGGCCAGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
ACGTTGCCTTTATCCCCCGACGTACATGATCTCCATGTTGTAGAACCATG10.28735632183908044No Hit
ACGTTGCCTTTATCCTCGACGTACATGATCTCCATGTTGTAGAACCATGT10.28735632183908044No Hit
GCAGCAATCTTCACTCGGTAGGGGAGGTGACTAATGGCGATGTTGTAGAA10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATCTCCAGGGGGTAGAACCA10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGCCCATGTTGTAGAA10.28735632183908044No Hit
GAATCAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
GCATCAATCATCACAGGTTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGCCGAGGTTGTAGAA10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCTCTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
GCATCAATCTTCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCAGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
GCATCAATCATCCAGGGTTTGCCAGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
ACGTCGCCTTTATCCTCCCCGACGTACATGATCTCCATGTTGTAGAACCA10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCGGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATTTCCATGTTGTAGAACCA10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCCCGACGTCCATGATCTCCATGGTGTAGAACCA10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCATAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
ACGTATCGTATATCCTCCCAGACGTCCATGATCACCTTGTTGTAGCACGA10.28735632183908044No Hit
GCATCAATCATCAAGGGTTGGCCAGCTCATAATGGCCATGTTGTAGAACC10.28735632183908044No Hit
GCATAAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATCACCATGTTGTAGAACCA10.28735632183908044No Hit
GCACAATCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
ACGTGGCCGTTATCCTCCCGACGTCCATGATCTCCTTGTTGTAGCACCAG10.28735632183908044No Hit
GAATCAATCATCACAGCGTTGGACAGCTAACAAATGGCCATGTTGAAGAA10.28735632183908044No Hit
GCAACAATCATCACAGGGTTGGCCAGCTCACTAATGACCATGTTGTAGAA10.28735632183908044No Hit
GCATCAACATCACAGGTTGGCCAGCTCACTAATGGCCATGTTGAAGAACC10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTATGGCCATGTTGTAGAAC10.28735632183908044No Hit
GCATCAATCATCACAGGGTAGGGCAGCTCACTAATGGCCATGTTGTTGAA10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCCCACGTACATGATCTCCATGTTGTAGAACCAT10.28735632183908044No Hit
GCATCAATCATCACAGCGTTGGCCATCTCACTAATGTCCATGTTGAAGAA10.28735632183908044No Hit
GCATAAATAATCAAGGCTTGGCAAGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACGAATGGCCATGTTGTAGAA10.28735632183908044No Hit
GCATCACTCTTCACAGGCTTGTCCAGCTGACTAATGGCCATGTTGTAGAG10.28735632183908044No Hit
GCATCAACATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
GCATCATTCATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
GCATCAATCATCACAGGGTTGTCCAGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
GCATCAATCATACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTCGAAC10.28735632183908044No Hit
CGTTGCCTTTATCCTCCCGACGTACATGATCTCCATGTTGTAGAACCATG10.28735632183908044No Hit
GCATCAATCATCACAGGTTGCCAGCTCACTAATGGCCATGTTGTAGAACC10.28735632183908044No Hit
GCATCAATCTCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
GAATCAATCATCACAGGGTTGTCCAGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
ACGTTGCCTTTATCCACCCCGACGTACATGATCTCCATGTTGTAGAACCA10.28735632183908044No Hit
GCATCAATCATAACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAA10.28735632183908044No Hit
GCATCAATATCACAGGGTTGGCCAGCTCACTAATGGCCATGTTGTAGAAC10.28735632183908044No Hit
GAATCAATCATCACAGGGTTGGCCATCTCACTAATGGCCAAGTTGTATAA10.28735632183908044No Hit
GAATCAATAATCACAGGGTTGTCCAGCTCAATAATGGCCATGTTGTAGAA10.28735632183908044No Hit
ACGTTGCCTTTATCCTCCCAGATCCAGGAGTGGGGCCCATTCGATCTGGT10.28735632183908044No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)