FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008130526

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008130526
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3952
Total Bases570.6 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC56

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC294974.62044534412956No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAA1724.352226720647773No Hit
CCATTAGTGAGCTGGCCAACCCAAGGTTGCTGGCTATACCTCGAGAAATC691.7459514170040487No Hit
CCATTAGTGAGCTGGCCAACCAAGGTTGCTGGCTATACCTCGAGAAATCG511.290485829959514No Hit
CATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG501.2651821862348178No Hit
CCATTAGTGAGCTGGCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG370.9362348178137652No Hit
CCTTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG160.4048582995951417No Hit
CCATTAGTGAGCTGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG160.4048582995951417No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGATATC150.37955465587044535No Hit
CCATTAGTGAGCGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG150.37955465587044535No Hit
CCATTAGTGGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG130.3289473684210526No Hit
CCATTAGTGAGCTGGCCAACCCCGAGAACCAGTTCAGAGTGGACTACATC120.30364372469635625No Hit
CCATTAGTAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG120.30364372469635625No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTC120.30364372469635625No Hit
CCATTAGTGAGCTGGCCACACCAAGGTTGCTGGCTATACCTCGAGAAATC110.2783400809716599No Hit
CCATTATGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG90.2277327935222672No Hit
CCTTTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC90.2277327935222672No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAACC90.2277327935222672No Hit
CCATTAGTGAGCTGGCCATACCAAGGTTGCTGGCTATACCTCGAGAAATC90.2277327935222672No Hit
CCATTAGGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG80.20242914979757085No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAGTC80.20242914979757085No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGTTGGCTATACCTCGAGAAATC70.1771255060728745No Hit
TCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC70.1771255060728745No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTACTGGCTATACCTCGAGAAATC70.1771255060728745No Hit
CCATTAGTGAGCTGGCAACCCTGTGATGATTGATGCTCACAGAGACCAAG70.1771255060728745No Hit
CCATTAGTGAGCTGGCCAATCCAAGGTTGCTGGCTATACCTCGAGAAATC70.1771255060728745No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATT70.1771255060728745No Hit
CCATAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG60.15182186234817813No Hit
CTATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC60.15182186234817813No Hit
CAATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC60.15182186234817813No Hit
CCATTAGTGAGCTGGCCAAACCAGGGTTGCTGGCTATACCTCGAGAAATC50.12651821862348178No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGGAATC50.12651821862348178No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATATCTCGAGAAATC50.12651821862348178No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTCGCTGGCTATACCTCGAGAAATC50.12651821862348178No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCCATACCTCGAGAAATC50.12651821862348178No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCTCACAGAGACCAA50.12651821862348178No Hit
CCATTAGTGAGCTGGTCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC50.12651821862348178No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCAGGCTATACCTCGAGAAATC50.12651821862348178No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCCGGCTATACCTCGAGAAATC50.12651821862348178No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCTCACAGAGACCAA50.12651821862348178No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCCCGAGAAATC50.12651821862348178No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGGGAAATC50.12651821862348178No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGTTATACCTCGAGAAATC40.10121457489878542No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGACTATACCTCGAGAAATC40.10121457489878542No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCACGAGAAATC40.10121457489878542No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACTTCGAGAAATC40.10121457489878542No Hit
CCATTGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG40.10121457489878542No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATGCCTCGAGAAATC40.10121457489878542No Hit
CCATTAGTGAACTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC40.10121457489878542No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTACACCTCGAGAAATC40.10121457489878542No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAGATC40.10121457489878542No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTGTACCTCGAGAAATC40.10121457489878542No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCAATACCTCGAGAAATC40.10121457489878542No Hit
CCATTAGTGAGCTGGCCAAACCCGAGAACCAGTTCAGAGTGGACTACATC40.10121457489878542No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)