FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008130574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008130574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6398
Total Bases925.4 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC251339.27789934354486No Hit
AGATCATGTACGTCGGGGACGTCCGCAGCGTCACACAGAAGCATATCCAG122919.209127852453893No Hit
AGATCATGTACGTCGGGGACGTCCGCAGCGTCACACAGAAGCATGAGTGG98115.332916536417631No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAA3645.689277899343545No Hit
CCATTAGTGAGCTGGCCAACCCAAGGTTGCTGGCTATACCTCGAGAAATC741.156611441075336No Hit
CCATTAGTGAGCTGGCCAACCAAGGTTGCTGGCTATACCTCGAGAAATCG470.734604563926227No Hit
CATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG470.734604563926227No Hit
AGATCATGTACGTCGGGGACGTCCGCAGCGTCACACAGAAGCGTGAGTGG350.5470459518599562No Hit
CCATTAGTGAGCTGGCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG340.5314160675211004No Hit
CCTTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG250.39074710847139726No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTC170.2657080337605502No Hit
AGATCATGTACGTCGGGACGTCCGCAGCGTCACACAGAAGCATATCCAGG160.25007814942169426No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGATATC130.20318849640512662No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCTCACAGAGACCAA120.1875586120662707No Hit
CCATTAGTGGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG110.17192872772741483No Hit
AGATCATGTACGTCGGGGACGTCCGCAGCGTCACGCAGAAGCATGAGTGG110.17192872772741483No Hit
CCATTAGTGAGCTGGCCAAACCAAGGCTGCTGGCTATACCTCGAGAAATC110.17192872772741483No Hit
CCATTAGTGAGCGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG110.17192872772741483No Hit
CCATTATGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG110.17192872772741483No Hit
CCATTAGTAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG110.17192872772741483No Hit
AGATCATGTACGTGGGGACGTCCGCAGCGTCACACAGAAGCATATCCAGG110.17192872772741483No Hit
AGATCATGTAGTCGGGGACGTCCGCAGCGTCACACAGAAGCATATCCAGG100.15629884338855893No Hit
AGATCATGTACGTCGGGGCGTCCGCAGCGTCACACAGAAGCATGAGTGGG90.14066895904970303No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTCGCTGGCTATACCTCGAGAAATC90.14066895904970303No Hit
CCATTAGTGAGCTGGCCCAACCAAGGTTGCTGGCTATACCTCGAGAAATC90.14066895904970303No Hit
CCATTAGTGAGCTGGCAAACCCTGTGATGATTGATGCTCACAGAGACCAA90.14066895904970303No Hit
CCATTAGTGAGCTGGCCAACCCCGAGAACCAGTTCAGAGTGGACTACATT80.12503907471084713No Hit
AGATATGTACGTCGGGGACGTCCGCAGCGTCACACAGAAGCATGAGTGGG80.12503907471084713No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGGGAAATC80.12503907471084713No Hit
AGATCATGTACGTGGGGACGTCCGCAGCGTCACACAGAAGCATGAGTGGG70.10940919037199125No Hit
AGATCATGTACGCGGGGACGTCCGCAGCGTCACACAGAAGCATGAGTGGG70.10940919037199125No Hit
AGATCATGTACGCGGGGACGTCCGCAGCGTCACACAGAAGCATATCCAGG70.10940919037199125No Hit
CTATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC70.10940919037199125No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAACC70.10940919037199125No Hit
AGATCATGTAGTCGGGGACGTCCGCAGCGTCACACAGAAGCATGAGTGGG70.10940919037199125No Hit
AGATCATGTACGTCGGGGCGTCCGCAGCGTCACACAGAAGCATATCCAGG70.10940919037199125No Hit
CCATTAGTGAGCTGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG70.10940919037199125No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)