FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008130628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008130628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3988
Total Bases575.8 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC56

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC287572.0912738214644No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTCACAGAGACCAA2446.118355065195587No Hit
CCATTAGTGAGCTGGCCAACCCAAGGTTGCTGGCTATACCTCGAGAAATC791.9809428284854564No Hit
CCATTAGTGAGCTGGCCAACCAAGGTTGCTGGCTATACCTCGAGAAATCG571.4292878635907722No Hit
CATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG350.8776328986960883No Hit
CCATTAGTGAGCTGGCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG290.7271815446339017No Hit
CCTTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG150.37612838515546637No Hit
CCATTAGTGAGCTGGCCATACCAAGGTTGCTGGCTATACCTCGAGAAATC150.37612838515546637No Hit
CCATTAGTGGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG140.3510531594784353No Hit
CCATTAGTGAGCGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG140.3510531594784353No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCCCGAGAAATC120.3009027081243731No Hit
CAATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC120.3009027081243731No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTTCACAGAGACCAAGTC120.3009027081243731No Hit
CCATTAGTAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG110.275827482447342No Hit
CCATTAGTGAGCTGGCCACACCAAGGTTGCTGGCTATACCTCGAGAAATC110.275827482447342No Hit
CCATTAGTGAGCTGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG100.25075225677031093No Hit
CCATTAGGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG100.25075225677031093No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGTTGGCTATACCTCGAGAAATC90.22567703109327986No Hit
CCATTAGTGAGTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG90.22567703109327986No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGGAATC80.20060180541624875No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGATATC80.20060180541624875No Hit
CCATTAGTGAGCTGGCCCAACCAAGGTTGCTGGCTATACCTCGAGAAATC80.20060180541624875No Hit
CCTTTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC80.20060180541624875No Hit
CCATTGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG80.20060180541624875No Hit
CCATTAGTGAGCTGGCCAAACCAAGGCTGCTGGCTATACCTCGAGAAATC80.20060180541624875No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGGGAAATC80.20060180541624875No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTACACCTCGAGAAATC80.20060180541624875No Hit
CCATTATGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG70.17552657973921765No Hit
CCATTAGTGAGCTGGCCAACCCTTGATGATTGATGCTCACAGAGACCAAG70.17552657973921765No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTACTGGCTATACCTCGAGAAATC70.17552657973921765No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAACC70.17552657973921765No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAGTC70.17552657973921765No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATATCTCGAGAAATC60.15045135406218654No Hit
CCATTAGTGACTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG60.15045135406218654No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGATGGCTATACCTCGAGAAATC60.15045135406218654No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCCATACCTCGAGAAATC60.15045135406218654No Hit
CCATAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG60.15045135406218654No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACTTCGAGAAATC60.15045135406218654No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCCGGCTATACCTCGAGAAATC60.15045135406218654No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATGCCTCGAGAAATC60.15045135406218654No Hit
CCATTAGTGAGCTGGCCAAGCCAAGGTTGCTGGCTATACCTCGAGAAATC60.15045135406218654No Hit
CCACTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC60.15045135406218654No Hit
CCATTAGTGAGCTGGCCAAACCAGGGTTGCTGGCTATACCTCGAGAAATC50.12537612838515547No Hit
CCATCAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC50.12537612838515547No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTAGCTATACCTCGAGAAATC50.12537612838515547No Hit
CCATTAGTGAGCTGGCCAAACCAAGGATGCTGGCTATACCTCGAGAAATC50.12537612838515547No Hit
TCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC50.12537612838515547No Hit
CTATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC50.12537612838515547No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCAGGCTATACCTCGAGAAATC50.12537612838515547No Hit
CCATTAGTGAGCTGACCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC50.12537612838515547No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTGTACCTCGAGAAATC50.12537612838515547No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGTTATACCTCGAGAAATC40.10030090270812438No Hit
CCATTAGCGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC40.10030090270812438No Hit
CCATTAGTGAGCTGGCTAAACCAAGGTTGCTGGCTATACCTCGAGAAATC40.10030090270812438No Hit
CCATTAGAGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC40.10030090270812438No Hit
CCATTAGTGAGCTGGCCAAACCGAGGTTGCTGGCTATACCTCGAGAAATC40.10030090270812438No Hit
CCATTAGTGAGCCGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC40.10030090270812438No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATT40.10030090270812438No Hit
ACATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC40.10030090270812438No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)