FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008131010

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008131010
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2211
Total Bases320.3 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA103246.675712347354136No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC29913.523292627770239No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTC28212.754409769335142No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAA572.578018995929444No Hit
AGATCATGTACGTCGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCT251.1307100859339665No Hit
CCATTAGTGAGCTGGCAACCCTGTGATGATTGATGCCTGCATAGACCAAG200.9045680687471733No Hit
CATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG180.8141112618724559No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATGATGCCTGCATAGACCAAG170.7688828584350972No Hit
CCATTAGTGAGCTGGCCAACCCAAGGTTGCTGGCTATACCTCGAGAAATC110.4975124378109453No Hit
CCATTAGTGAGCTGGCCAACCCTGTATGATTGATGCCTGCATAGACCAAG110.4975124378109453No Hit
CCATTAGTAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG90.40705563093622793No Hit
CCATTAGTGAGCTGGCAAACCCTGTGATGATTGATGCCTGCATAGACCAA90.40705563093622793No Hit
CCATTAGTGGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG90.40705563093622793No Hit
CCTTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG80.3618272274988693No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAGATTGATGCCTGCATAGACCAAG80.3618272274988693No Hit
AGATCATGTACGTCGGGGAGGATAAAAGGCAACGTCTGCATAGACCAAGT80.3618272274988693No Hit
CATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG80.3618272274988693No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCCTGCATAGACCAA70.31659882406151063No Hit
CCATTATGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG70.31659882406151063No Hit
CCATTGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG70.31659882406151063No Hit
CCATTAGTGAGCTGGCCACCCTGTGATGATTGATGCCTGCATAGACCAAG70.31659882406151063No Hit
CCATTAGTGAGTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG70.31659882406151063No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATCCTGCATAGACCAAG70.31659882406151063No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTGCATAGACCAAG60.27137042062415195No Hit
CCATTAGTGAGCTGGCCAACCTGTGATGATTGATGCCTGCATAGACCAAG60.27137042062415195No Hit
CCATAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG60.27137042062415195No Hit
CCATTAGTGAGTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG60.27137042062415195No Hit
AGATCATGTACGTCGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCTC60.27137042062415195No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATATTGATGCCTGCATAGACCAAG50.22614201718679333No Hit
CCATTAGGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG50.22614201718679333No Hit
CCATTAGTGAGCGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG50.22614201718679333No Hit
CCATTAGTGAGCTGGCCAACCCTGGATGATTGATGCCTGCATAGACCAAG50.22614201718679333No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTATGCCTGCATAGACCAAG50.22614201718679333No Hit
AGATCATGTACGTCGGGGAGGATAAGGCAACGTCTGCATAGACCAAGTCT40.18091361374943465No Hit
CCATTAGTGAGCTGGCCAACCCTTGATGATTGATGCCTGCATAGACCAAG40.18091361374943465No Hit
AGATCATGTACGTCGGGGGGATAAAGGCAACGTCTGCATAGACCAAGTCT40.18091361374943465No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGAATGCCTGCATAGACCA40.18091361374943465No Hit
AGATCATGTACGTGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCT40.18091361374943465No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCAAAGACCAA40.18091361374943465No Hit
AGATCATGTACGTCGGGGATAAAGGCAACGTCTGCATAGACCAAGTCTCT40.18091361374943465No Hit
AGATCATGTACGTCGAGGATAAAGGCAACGTCTGCATAGACCAAGTCTCT30.13568521031207598No Hit
CCATTATGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG30.13568521031207598No Hit
AGATATGTACGTCGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCT30.13568521031207598No Hit
CCATTAGTGACTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.13568521031207598No Hit
CCATTAGTGAGTTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA30.13568521031207598No Hit
CCATTAGTGAGCTGGCCAACCAAGGTTGCTGGCTATACCTCGAGAAATCG30.13568521031207598No Hit
CCATTAGTGGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG30.13568521031207598No Hit
CCTTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG30.13568521031207598No Hit
AGATCATGTACGTCGGGGGATAAAGGCAACGTCTGCATAGACCAAGTCTC30.13568521031207598No Hit
CCATTAGTGAGCTGGCCAAACTGTGATGATTGATGCCTGCATAGACCAAG30.13568521031207598No Hit
CCATTAGTGACTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG30.13568521031207598No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCCATACCTCGAGAAATC30.13568521031207598No Hit
CCATTAGTGAGCTGGCCAACCCGTGATGATTGATGCCTGCATAGACCAAG30.13568521031207598No Hit
CCATTAGTGAGCTGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.13568521031207598No Hit
AGATCATGTACGTGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCTC30.13568521031207598No Hit
CCATTAGTGAGCTGGTCAACCCTGTGATGATTGATGCCTGCATAGACCAA30.13568521031207598No Hit
CCATTAGTGAGCTGGCCAATCCTGTGATGATTGATGCCTGCATAGACCAA30.13568521031207598No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)