FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008131168

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008131168
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1978
Total Bases286.8 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA116558.89787664307381No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTC27313.801820020222447No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAA804.044489383215369No Hit
CATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG211.0616784630940344No Hit
CCATTAGTGAGCTGGCAACCCTGTGATGATTGATGCCTGCATAGACCAAG201.0111223458038423No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATGATGCCTGCATAGACCAAG160.8088978766430739No Hit
CCATTAGTGAGCTGGCCAACCCTGTATGATTGATGCCTGCATAGACCAAG140.7077856420626896No Hit
AGATCATGTACGTCGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCT140.7077856420626896No Hit
CCATTAGTGAGCTGGCCAACCCTTGATGATTGATGCCTGCATAGACCAAG130.6572295247724975No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTATGCCTGCATAGACCAAG120.6066734074823054No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATCCTGCATAGACCAAG110.5561172901921132No Hit
CCATTAGTGAGTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG100.5055611729019212No Hit
CCATTAGTAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG90.455005055611729No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATATTGATGCCTGCATAGACCAAG90.455005055611729No Hit
CCATTATGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG80.40444893832153694No Hit
CCATTAGTGAGCTGGCCAACCCTGGATGATTGATGCCTGCATAGACCAAG80.40444893832153694No Hit
CCATTAGTGGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG80.40444893832153694No Hit
CCATTAGTGACTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG70.3538928210313448No Hit
AGATCATGTACGTCGGGGAGGATAAAAGGCAACGTCTGCATAGACCAAGT70.3538928210313448No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCCTGCATAGACCAA60.3033367037411527No Hit
CCTTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG60.3033367037411527No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTGCATAGACCAAG60.3033367037411527No Hit
CCATTAGTGAGCTGGCAAACCCTGTGATGATTGATGCCTGCATAGACCAA60.3033367037411527No Hit
CCATTGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG60.3033367037411527No Hit
CCATTAGTGAGCTGGCCAACCCGTGATGATTGATGCCTGCATAGACCAAG60.3033367037411527No Hit
CCATAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG60.3033367037411527No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGTTGATGCCTGCATAGACCAAG50.2527805864509606No Hit
AGATCATGTACGTCGAGGATAAAGGCAACGTCTGCATAGACCAAGTCTCT40.20222446916076847No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAGATTGATGCCTGCATAGACCAAG40.20222446916076847No Hit
CCATTAGGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.20222446916076847No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGAGCCTGCATAGACCAAG40.20222446916076847No Hit
CCATTAGTGAGCTGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.20222446916076847No Hit
CCATTAGTGAGCGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.20222446916076847No Hit
CCATTAGTGAGCTGGCCAACCTGTGATGATTGATGCCTGCATAGACCAAG40.20222446916076847No Hit
AGATCATGTACGTGGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTC30.15166835187057634No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATACCTGCATAGACCAA30.15166835187057634No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCCTGCATAGACCA30.15166835187057634No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGAATGCCTGCATAGACCA30.15166835187057634No Hit
AGATCATGTAGTCGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCT30.15166835187057634No Hit
CCATTAGTGAGCTGGTCAACCCTGTGATGATTGATGCCTGCATAGACCAA30.15166835187057634No Hit
AGATCATGTACGTCGGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGT30.15166835187057634No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGAATGATGCCTGCATAGACCAA30.15166835187057634No Hit
AGATCATGTACGTCGGGGATAAAGGCAACGTCTGCATAGACCAAGTCTCT30.15166835187057634No Hit
CCATTAGTGAGCTGGCCACCCTGTGATGATTGATGCCTGCATAGACCAAG30.15166835187057634No Hit
AGATCATGTACGTCGGGGAGGATAAAGCAACGTCTGCATAGACCAAGTCT30.15166835187057634No Hit
CCATTAGTGAGCTGGCCAACCCTGCGATGATTGATGCCTGCATAGACCAA20.10111223458038424No Hit
CCATTAGTGAGTTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.10111223458038424No Hit
AGATCATGTACGTCGGGGAGGATAAGGCAACGTCTGCATAGACCAAGTCT20.10111223458038424No Hit
AGATCATGTACGTCGGGGACGATAAAGGCAACGTCTGCATAGACCAAGTC20.10111223458038424No Hit
AGATCATGTACGCGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCT20.10111223458038424No Hit
CCATTAGTGAGCTGGCCAACCATGTGATGATTGATGCCTGCATAGACCAA20.10111223458038424No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGACTGCATAGACCAAGTC20.10111223458038424No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGCTGCATAGACCAAGTCT20.10111223458038424No Hit
AGATCATGTACGTCGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCTC20.10111223458038424No Hit
CATTGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAGT20.10111223458038424No Hit
CCATTAGTGATCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.10111223458038424No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGTGCCTGCATAGACCAAG20.10111223458038424No Hit
AGATCATGTATGTCGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTC20.10111223458038424No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCACGTCTGCATAGACCAAGTCT20.10111223458038424No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)