FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008131182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008131182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1195
Total Bases173.2 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC59

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA74162.00836820083681No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAA867.1966527196652725No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTC816.7782426778242675No Hit
CATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG121.00418410041841No Hit
CCATTAGTGAGCTGGCCACCCTGTGATGATTGATGCCTGCATAGACCAAG90.7531380753138075No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCCTGCATAGACCAA80.6694560669456067No Hit
CCATTAGTGAGCTGGCAACCCTGTGATGATTGATGCCTGCATAGACCAAG80.6694560669456067No Hit
CCATTAGTGAGTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG80.6694560669456067No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAGATTGATGCCTGCATAGACCAAG70.5857740585774058No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTGCATAGACCAAG60.502092050209205No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATGATGCCTGCATAGACCAAG60.502092050209205No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTATGCCTGCATAGACCAAG60.502092050209205No Hit
CCATTGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG60.502092050209205No Hit
AGATCATGTACGTCGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCT60.502092050209205No Hit
AGATCATGTACGTCGAGGATAAAGGCAACGTCTGCATAGACCAAGTCTCT50.41841004184100417No Hit
CCTTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG50.41841004184100417No Hit
CCATTAGTGAGCTGGCCAACCCTGGATGATTGATGCCTGCATAGACCAAG50.41841004184100417No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGAGCCTGCATAGACCAAG50.41841004184100417No Hit
AGATCATGTACGTCGGGGAGGATAAAAGGCAACGTCTGCATAGACCAAGT40.33472803347280333No Hit
CCATTATGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.33472803347280333No Hit
CCATTAGTGAGCTGGCAAACCCTGTGATGATTGATGCCTGCATAGACCAA40.33472803347280333No Hit
CCATTAGTGAGCTGGCCAACCCTGTATGATTGATGCCTGCATAGACCAAG40.33472803347280333No Hit
CCATTAGTGGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.33472803347280333No Hit
CCATTAGTAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.2510460251046025No Hit
CCATTAGTGACTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.2510460251046025No Hit
CCATTAGTGAGCTGGCCAACCTGTGATGATTGATGCCTGCATAGACCAAG30.2510460251046025No Hit
CCATAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.2510460251046025No Hit
CCATTAGTGAGCTGGCCAACCCTTGATGATTGATGCCTGCATAGACCAAG30.2510460251046025No Hit
CCATTAGTGAGCCGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA30.2510460251046025No Hit
CCATTAGTGAGCTGGCCAACCCGTGATGATTGATGCCTGCATAGACCAAG30.2510460251046025No Hit
CCATTAGTGAGCTGGTCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.16736401673640167No Hit
AGATATGTACGTCGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCT20.16736401673640167No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGACTGATGCCTGCATAGACCAA20.16736401673640167No Hit
CCATTAGCGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.16736401673640167No Hit
CCATTAGTGAGCTGGCCAAACCAAACAGCCTTCCAGCTCTGTCCCGTGAG20.16736401673640167No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCAAAGACCAA20.16736401673640167No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGAAGCCTGCATAGACCAA20.16736401673640167No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAAGATTGATGCCTGCATAGACCAA20.16736401673640167No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGTCTGCATAGACCAA20.16736401673640167No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGTTGATGCCTGCATAGACCAAG20.16736401673640167No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATATTGATGCCTGCATAGACCAAG20.16736401673640167No Hit
CCATTAGTGAGCTGGCCAACTCTGTGATGATTGATGCCTGCATAGACCAA20.16736401673640167No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGTGCCTGCATAGACCAAG20.16736401673640167No Hit
CAATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.16736401673640167No Hit
AGATCATGTACGTCGGGGAGGATAAAGGAACGTCTGCATAGACCAAGTCT20.16736401673640167No Hit
CCATTAGTGAGCTGGCCATCCCTGTGATGATTGATGCCTGCATAGACCAA20.16736401673640167No Hit
CATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAAG20.16736401673640167No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATCCTGCATAGACCAAG20.16736401673640167No Hit
CCATTAGTGAGCTGGCAACCCTGTGATGATGATGCCTGCATAGACCAAGT20.16736401673640167No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)